Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11565 and BWI76_RS11570 are separated by 142 nucleotides BWI76_RS11570 and BWI76_RS11575 are separated by 130 nucleotides BWI76_RS11575 and BWI76_RS11580 are separated by 10 nucleotides
BWI76_RS11565: BWI76_RS11565 - DeoR family transcriptional regulator, at 2,433,118 to 2,433,876
_RS11565
BWI76_RS11570: BWI76_RS11570 - MFS transporter, at 2,434,019 to 2,435,374
_RS11570
BWI76_RS11575: BWI76_RS11575 - nicotinamidase/pyrazinamidase, at 2,435,505 to 2,436,146
_RS11575
BWI76_RS11580: BWI76_RS11580 - L-asparaginase 1, at 2,436,157 to 2,437,173
_RS11580
Position (kb)
2434
2435
2436 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2433.109 kb on + strand at 2433.243 kb on + strand, within BWI76_RS11565 at 2433.250 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.286 kb on + strand, within BWI76_RS11565 at 2433.331 kb on + strand, within BWI76_RS11565 at 2433.415 kb on + strand, within BWI76_RS11565 at 2433.417 kb on + strand, within BWI76_RS11565 at 2433.425 kb on + strand, within BWI76_RS11565 at 2433.475 kb on + strand, within BWI76_RS11565 at 2433.480 kb on + strand, within BWI76_RS11565 at 2433.490 kb on + strand at 2433.500 kb on + strand, within BWI76_RS11565 at 2433.542 kb on + strand, within BWI76_RS11565 at 2433.625 kb on + strand, within BWI76_RS11565 at 2433.632 kb on + strand, within BWI76_RS11565 at 2433.632 kb on + strand, within BWI76_RS11565 at 2433.640 kb on + strand, within BWI76_RS11565 at 2433.640 kb on + strand, within BWI76_RS11565 at 2433.649 kb on + strand, within BWI76_RS11565 at 2433.649 kb on + strand, within BWI76_RS11565 at 2433.656 kb on + strand, within BWI76_RS11565 at 2433.661 kb on + strand, within BWI76_RS11565 at 2433.666 kb on + strand, within BWI76_RS11565 at 2433.667 kb on + strand, within BWI76_RS11565 at 2433.668 kb on + strand, within BWI76_RS11565 at 2433.735 kb on + strand, within BWI76_RS11565 at 2433.756 kb on + strand, within BWI76_RS11565 at 2433.763 kb on + strand, within BWI76_RS11565 at 2433.763 kb on + strand, within BWI76_RS11565 at 2433.816 kb on + strand at 2433.824 kb on + strand at 2433.828 kb on + strand at 2433.833 kb on + strand at 2433.918 kb on + strand at 2433.987 kb on - strand at 2434.022 kb on + strand at 2434.025 kb on - strand at 2434.027 kb on + strand at 2434.034 kb on - strand at 2434.034 kb on - strand at 2434.035 kb on - strand at 2434.054 kb on - strand at 2434.063 kb on - strand at 2434.063 kb on - strand at 2434.063 kb on - strand at 2434.176 kb on + strand, within BWI76_RS11570 at 2434.199 kb on + strand, within BWI76_RS11570 at 2434.206 kb on + strand, within BWI76_RS11570 at 2434.206 kb on + strand, within BWI76_RS11570 at 2434.206 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.211 kb on + strand, within BWI76_RS11570 at 2434.214 kb on - strand, within BWI76_RS11570 at 2434.214 kb on - strand, within BWI76_RS11570 at 2434.219 kb on - strand, within BWI76_RS11570 at 2434.219 kb on - strand, within BWI76_RS11570 at 2434.371 kb on + strand, within BWI76_RS11570 at 2434.373 kb on + strand, within BWI76_RS11570 at 2434.386 kb on + strand, within BWI76_RS11570 at 2434.515 kb on + strand, within BWI76_RS11570 at 2434.579 kb on + strand, within BWI76_RS11570 at 2434.584 kb on - strand, within BWI76_RS11570 at 2434.744 kb on + strand, within BWI76_RS11570 at 2434.811 kb on - strand, within BWI76_RS11570 at 2434.815 kb on + strand, within BWI76_RS11570 at 2435.139 kb on + strand, within BWI76_RS11570 at 2435.714 kb on + strand, within BWI76_RS11575 at 2435.877 kb on + strand, within BWI76_RS11575 at 2435.917 kb on - strand at 2435.947 kb on + strand, within BWI76_RS11575 at 2435.955 kb on - strand, within BWI76_RS11575 at 2436.064 kb on + strand, within BWI76_RS11575 at 2436.071 kb on - strand, within BWI76_RS11575
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 2,433,109 + -0.9 2,433,243 + BWI76_RS11565 0.16 -1.6 2,433,250 + BWI76_RS11565 0.17 -0.2 2,433,286 + BWI76_RS11565 0.22 +0.1 2,433,286 + BWI76_RS11565 0.22 +1.1 2,433,286 + BWI76_RS11565 0.22 +0.9 2,433,286 + BWI76_RS11565 0.22 +0.6 2,433,286 + BWI76_RS11565 0.22 +0.1 2,433,331 + BWI76_RS11565 0.28 -0.2 2,433,415 + BWI76_RS11565 0.39 -0.0 2,433,417 + BWI76_RS11565 0.39 -2.3 2,433,425 + BWI76_RS11565 0.40 -0.9 2,433,475 + BWI76_RS11565 0.47 +0.1 2,433,480 + BWI76_RS11565 0.48 -3.0 2,433,490 + +1.0 2,433,500 + BWI76_RS11565 0.50 -0.5 2,433,542 + BWI76_RS11565 0.56 -0.3 2,433,625 + BWI76_RS11565 0.67 -0.1 2,433,632 + BWI76_RS11565 0.68 +1.8 2,433,632 + BWI76_RS11565 0.68 -1.2 2,433,640 + BWI76_RS11565 0.69 -1.8 2,433,640 + BWI76_RS11565 0.69 +0.4 2,433,649 + BWI76_RS11565 0.70 +0.5 2,433,649 + BWI76_RS11565 0.70 +0.1 2,433,656 + BWI76_RS11565 0.71 +1.0 2,433,661 + BWI76_RS11565 0.72 -0.6 2,433,666 + BWI76_RS11565 0.72 +0.1 2,433,667 + BWI76_RS11565 0.72 -2.9 2,433,668 + BWI76_RS11565 0.72 -1.0 2,433,735 + BWI76_RS11565 0.81 +0.9 2,433,756 + BWI76_RS11565 0.84 -0.5 2,433,763 + BWI76_RS11565 0.85 +0.4 2,433,763 + BWI76_RS11565 0.85 +1.0 2,433,816 + -1.2 2,433,824 + -0.2 2,433,828 + +0.4 2,433,833 + -0.1 2,433,918 + -0.1 2,433,987 - -0.7 2,434,022 + -4.7 2,434,025 - +0.6 2,434,027 + +1.0 2,434,034 - -2.1 2,434,034 - -0.9 2,434,035 - -1.0 2,434,054 - -1.3 2,434,063 - +0.2 2,434,063 - +0.0 2,434,063 - +1.6 2,434,176 + BWI76_RS11570 0.12 -3.0 2,434,199 + BWI76_RS11570 0.13 -0.7 2,434,206 + BWI76_RS11570 0.14 +0.3 2,434,206 + BWI76_RS11570 0.14 -2.1 2,434,206 + BWI76_RS11570 0.14 -1.4 2,434,211 + BWI76_RS11570 0.14 -0.3 2,434,211 + BWI76_RS11570 0.14 -1.3 2,434,211 + BWI76_RS11570 0.14 -1.1 2,434,211 + BWI76_RS11570 0.14 -2.3 2,434,211 + BWI76_RS11570 0.14 -1.5 2,434,211 + BWI76_RS11570 0.14 +0.1 2,434,211 + BWI76_RS11570 0.14 -1.0 2,434,211 + BWI76_RS11570 0.14 -0.8 2,434,211 + BWI76_RS11570 0.14 -1.3 2,434,214 - BWI76_RS11570 0.14 -1.1 2,434,214 - BWI76_RS11570 0.14 -1.5 2,434,219 - BWI76_RS11570 0.15 -0.7 2,434,219 - BWI76_RS11570 0.15 -1.3 2,434,371 + BWI76_RS11570 0.26 -0.0 2,434,373 + BWI76_RS11570 0.26 +0.9 2,434,386 + BWI76_RS11570 0.27 +0.9 2,434,515 + BWI76_RS11570 0.37 +0.4 2,434,579 + BWI76_RS11570 0.41 -1.0 2,434,584 - BWI76_RS11570 0.42 -1.7 2,434,744 + BWI76_RS11570 0.53 -0.2 2,434,811 - BWI76_RS11570 0.58 +0.7 2,434,815 + BWI76_RS11570 0.59 +0.4 2,435,139 + BWI76_RS11570 0.83 -0.6 2,435,714 + BWI76_RS11575 0.33 -0.2 2,435,877 + BWI76_RS11575 0.58 +1.0 2,435,917 - +3.2 2,435,947 + BWI76_RS11575 0.69 -0.6 2,435,955 - BWI76_RS11575 0.70 +0.7 2,436,064 + BWI76_RS11575 0.87 +0.3 2,436,071 - BWI76_RS11575 0.88 +1.0
Or see this region's nucleotide sequence