Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11570

Experiment: Glycine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11565 and BWI76_RS11570 are separated by 142 nucleotidesBWI76_RS11570 and BWI76_RS11575 are separated by 130 nucleotidesBWI76_RS11575 and BWI76_RS11580 are separated by 10 nucleotides BWI76_RS11565: BWI76_RS11565 - DeoR family transcriptional regulator, at 2,433,118 to 2,433,876 _RS11565 BWI76_RS11570: BWI76_RS11570 - MFS transporter, at 2,434,019 to 2,435,374 _RS11570 BWI76_RS11575: BWI76_RS11575 - nicotinamidase/pyrazinamidase, at 2,435,505 to 2,436,146 _RS11575 BWI76_RS11580: BWI76_RS11580 - L-asparaginase 1, at 2,436,157 to 2,437,173 _RS11580 Position (kb) 2434 2435 2436Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2433.109 kb on + strandat 2433.243 kb on + strand, within BWI76_RS11565at 2433.250 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.286 kb on + strand, within BWI76_RS11565at 2433.331 kb on + strand, within BWI76_RS11565at 2433.415 kb on + strand, within BWI76_RS11565at 2433.417 kb on + strand, within BWI76_RS11565at 2433.425 kb on + strand, within BWI76_RS11565at 2433.475 kb on + strand, within BWI76_RS11565at 2433.480 kb on + strand, within BWI76_RS11565at 2433.490 kb on + strandat 2433.500 kb on + strand, within BWI76_RS11565at 2433.542 kb on + strand, within BWI76_RS11565at 2433.625 kb on + strand, within BWI76_RS11565at 2433.632 kb on + strand, within BWI76_RS11565at 2433.632 kb on + strand, within BWI76_RS11565at 2433.640 kb on + strand, within BWI76_RS11565at 2433.640 kb on + strand, within BWI76_RS11565at 2433.649 kb on + strand, within BWI76_RS11565at 2433.649 kb on + strand, within BWI76_RS11565at 2433.656 kb on + strand, within BWI76_RS11565at 2433.661 kb on + strand, within BWI76_RS11565at 2433.666 kb on + strand, within BWI76_RS11565at 2433.667 kb on + strand, within BWI76_RS11565at 2433.668 kb on + strand, within BWI76_RS11565at 2433.735 kb on + strand, within BWI76_RS11565at 2433.756 kb on + strand, within BWI76_RS11565at 2433.763 kb on + strand, within BWI76_RS11565at 2433.763 kb on + strand, within BWI76_RS11565at 2433.816 kb on + strandat 2433.824 kb on + strandat 2433.828 kb on + strandat 2433.833 kb on + strandat 2433.918 kb on + strandat 2433.987 kb on - strandat 2434.022 kb on + strandat 2434.025 kb on - strandat 2434.027 kb on + strandat 2434.034 kb on - strandat 2434.034 kb on - strandat 2434.035 kb on - strandat 2434.054 kb on - strandat 2434.063 kb on - strandat 2434.063 kb on - strandat 2434.063 kb on - strandat 2434.176 kb on + strand, within BWI76_RS11570at 2434.199 kb on + strand, within BWI76_RS11570at 2434.206 kb on + strand, within BWI76_RS11570at 2434.206 kb on + strand, within BWI76_RS11570at 2434.206 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.211 kb on + strand, within BWI76_RS11570at 2434.214 kb on - strand, within BWI76_RS11570at 2434.214 kb on - strand, within BWI76_RS11570at 2434.219 kb on - strand, within BWI76_RS11570at 2434.219 kb on - strand, within BWI76_RS11570at 2434.371 kb on + strand, within BWI76_RS11570at 2434.373 kb on + strand, within BWI76_RS11570at 2434.386 kb on + strand, within BWI76_RS11570at 2434.515 kb on + strand, within BWI76_RS11570at 2434.579 kb on + strand, within BWI76_RS11570at 2434.584 kb on - strand, within BWI76_RS11570at 2434.744 kb on + strand, within BWI76_RS11570at 2434.811 kb on - strand, within BWI76_RS11570at 2434.815 kb on + strand, within BWI76_RS11570at 2435.139 kb on + strand, within BWI76_RS11570at 2435.714 kb on + strand, within BWI76_RS11575at 2435.877 kb on + strand, within BWI76_RS11575at 2435.917 kb on - strandat 2435.947 kb on + strand, within BWI76_RS11575at 2435.955 kb on - strand, within BWI76_RS11575at 2436.064 kb on + strand, within BWI76_RS11575at 2436.071 kb on - strand, within BWI76_RS11575

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycine (N)
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2,433,109 + -0.9
2,433,243 + BWI76_RS11565 0.16 -1.6
2,433,250 + BWI76_RS11565 0.17 -0.2
2,433,286 + BWI76_RS11565 0.22 +0.1
2,433,286 + BWI76_RS11565 0.22 +1.1
2,433,286 + BWI76_RS11565 0.22 +0.9
2,433,286 + BWI76_RS11565 0.22 +0.6
2,433,286 + BWI76_RS11565 0.22 +0.1
2,433,331 + BWI76_RS11565 0.28 -0.2
2,433,415 + BWI76_RS11565 0.39 -0.0
2,433,417 + BWI76_RS11565 0.39 -2.3
2,433,425 + BWI76_RS11565 0.40 -0.9
2,433,475 + BWI76_RS11565 0.47 +0.1
2,433,480 + BWI76_RS11565 0.48 -3.0
2,433,490 + +1.0
2,433,500 + BWI76_RS11565 0.50 -0.5
2,433,542 + BWI76_RS11565 0.56 -0.3
2,433,625 + BWI76_RS11565 0.67 -0.1
2,433,632 + BWI76_RS11565 0.68 +1.8
2,433,632 + BWI76_RS11565 0.68 -1.2
2,433,640 + BWI76_RS11565 0.69 -1.8
2,433,640 + BWI76_RS11565 0.69 +0.4
2,433,649 + BWI76_RS11565 0.70 +0.5
2,433,649 + BWI76_RS11565 0.70 +0.1
2,433,656 + BWI76_RS11565 0.71 +1.0
2,433,661 + BWI76_RS11565 0.72 -0.6
2,433,666 + BWI76_RS11565 0.72 +0.1
2,433,667 + BWI76_RS11565 0.72 -2.9
2,433,668 + BWI76_RS11565 0.72 -1.0
2,433,735 + BWI76_RS11565 0.81 +0.9
2,433,756 + BWI76_RS11565 0.84 -0.5
2,433,763 + BWI76_RS11565 0.85 +0.4
2,433,763 + BWI76_RS11565 0.85 +1.0
2,433,816 + -1.2
2,433,824 + -0.2
2,433,828 + +0.4
2,433,833 + -0.1
2,433,918 + -0.1
2,433,987 - -0.7
2,434,022 + -4.7
2,434,025 - +0.6
2,434,027 + +1.0
2,434,034 - -2.1
2,434,034 - -0.9
2,434,035 - -1.0
2,434,054 - -1.3
2,434,063 - +0.2
2,434,063 - +0.0
2,434,063 - +1.6
2,434,176 + BWI76_RS11570 0.12 -3.0
2,434,199 + BWI76_RS11570 0.13 -0.7
2,434,206 + BWI76_RS11570 0.14 +0.3
2,434,206 + BWI76_RS11570 0.14 -2.1
2,434,206 + BWI76_RS11570 0.14 -1.4
2,434,211 + BWI76_RS11570 0.14 -0.3
2,434,211 + BWI76_RS11570 0.14 -1.3
2,434,211 + BWI76_RS11570 0.14 -1.1
2,434,211 + BWI76_RS11570 0.14 -2.3
2,434,211 + BWI76_RS11570 0.14 -1.5
2,434,211 + BWI76_RS11570 0.14 +0.1
2,434,211 + BWI76_RS11570 0.14 -1.0
2,434,211 + BWI76_RS11570 0.14 -0.8
2,434,211 + BWI76_RS11570 0.14 -1.3
2,434,214 - BWI76_RS11570 0.14 -1.1
2,434,214 - BWI76_RS11570 0.14 -1.5
2,434,219 - BWI76_RS11570 0.15 -0.7
2,434,219 - BWI76_RS11570 0.15 -1.3
2,434,371 + BWI76_RS11570 0.26 -0.0
2,434,373 + BWI76_RS11570 0.26 +0.9
2,434,386 + BWI76_RS11570 0.27 +0.9
2,434,515 + BWI76_RS11570 0.37 +0.4
2,434,579 + BWI76_RS11570 0.41 -1.0
2,434,584 - BWI76_RS11570 0.42 -1.7
2,434,744 + BWI76_RS11570 0.53 -0.2
2,434,811 - BWI76_RS11570 0.58 +0.7
2,434,815 + BWI76_RS11570 0.59 +0.4
2,435,139 + BWI76_RS11570 0.83 -0.6
2,435,714 + BWI76_RS11575 0.33 -0.2
2,435,877 + BWI76_RS11575 0.58 +1.0
2,435,917 - +3.2
2,435,947 + BWI76_RS11575 0.69 -0.6
2,435,955 - BWI76_RS11575 0.70 +0.7
2,436,064 + BWI76_RS11575 0.87 +0.3
2,436,071 - BWI76_RS11575 0.88 +1.0

Or see this region's nucleotide sequence