Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2431 and Dshi_2432 overlap by 4 nucleotides Dshi_2432 and Dshi_2433 are separated by 12 nucleotides Dshi_2433 and Dshi_2434 are separated by 72 nucleotides
Dshi_2431: Dshi_2431 - Monosaccharide-transporting ATPase (RefSeq), at 2,571,923 to 2,572,909
_2431
Dshi_2432: Dshi_2432 - Monosaccharide-transporting ATPase (RefSeq), at 2,572,906 to 2,573,889
_2432
Dshi_2433: Dshi_2433 - ABC transporter related (RefSeq), at 2,573,902 to 2,575,434
_2433
Dshi_2434: Dshi_2434 - rhamnose ABC transporter, periplasmic rhamnose-binding protein (RefSeq), at 2,575,507 to 2,576,508
_2434
Position (kb)
2573
2574
2575
2576 Strain fitness (log2 ratio)
-2
-1
0
1 at 2572.935 kb on - strand at 2572.996 kb on + strand at 2573.328 kb on + strand, within Dshi_2432 at 2573.329 kb on + strand, within Dshi_2432 at 2573.329 kb on + strand, within Dshi_2432 at 2573.329 kb on + strand, within Dshi_2432 at 2573.337 kb on - strand, within Dshi_2432 at 2573.389 kb on + strand, within Dshi_2432 at 2573.514 kb on + strand, within Dshi_2432 at 2573.764 kb on + strand, within Dshi_2432 at 2573.765 kb on - strand, within Dshi_2432 at 2573.838 kb on + strand at 2573.890 kb on + strand at 2573.929 kb on + strand at 2574.010 kb on - strand at 2574.191 kb on + strand, within Dshi_2433 at 2574.245 kb on - strand, within Dshi_2433 at 2574.285 kb on + strand, within Dshi_2433 at 2574.335 kb on - strand, within Dshi_2433 at 2574.359 kb on - strand, within Dshi_2433 at 2574.518 kb on + strand, within Dshi_2433 at 2574.526 kb on - strand, within Dshi_2433 at 2574.595 kb on + strand, within Dshi_2433 at 2574.601 kb on + strand, within Dshi_2433 at 2574.601 kb on + strand, within Dshi_2433 at 2574.601 kb on + strand, within Dshi_2433 at 2574.609 kb on - strand, within Dshi_2433 at 2574.609 kb on - strand, within Dshi_2433 at 2574.609 kb on - strand, within Dshi_2433 at 2574.610 kb on + strand, within Dshi_2433 at 2574.628 kb on + strand, within Dshi_2433 at 2574.638 kb on - strand, within Dshi_2433 at 2574.671 kb on - strand, within Dshi_2433 at 2574.760 kb on - strand, within Dshi_2433 at 2574.830 kb on + strand, within Dshi_2433 at 2574.896 kb on - strand, within Dshi_2433 at 2574.935 kb on + strand, within Dshi_2433 at 2574.954 kb on - strand, within Dshi_2433 at 2574.958 kb on + strand, within Dshi_2433 at 2574.965 kb on + strand, within Dshi_2433 at 2574.972 kb on - strand, within Dshi_2433 at 2574.972 kb on - strand, within Dshi_2433 at 2575.004 kb on + strand, within Dshi_2433 at 2575.006 kb on + strand, within Dshi_2433 at 2575.140 kb on + strand, within Dshi_2433 at 2575.180 kb on - strand, within Dshi_2433 at 2575.187 kb on + strand, within Dshi_2433 at 2575.357 kb on - strand at 2575.369 kb on + strand at 2575.369 kb on + strand at 2575.387 kb on - strand at 2575.407 kb on + strand at 2575.438 kb on - strand at 2575.462 kb on - strand at 2575.463 kb on - strand at 2575.470 kb on - strand at 2575.513 kb on - strand at 2575.592 kb on - strand at 2575.772 kb on - strand, within Dshi_2434 at 2575.813 kb on + strand, within Dshi_2434 at 2575.928 kb on - strand, within Dshi_2434 at 2576.026 kb on + strand, within Dshi_2434 at 2576.054 kb on + strand, within Dshi_2434 at 2576.111 kb on + strand, within Dshi_2434 at 2576.158 kb on + strand, within Dshi_2434 at 2576.189 kb on + strand, within Dshi_2434 at 2576.299 kb on - strand, within Dshi_2434 at 2576.315 kb on - strand, within Dshi_2434 at 2576.320 kb on - strand, within Dshi_2434 at 2576.430 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 2,572,935 - -0.7 2,572,996 + -1.2 2,573,328 + Dshi_2432 0.43 -0.9 2,573,329 + Dshi_2432 0.43 +0.1 2,573,329 + Dshi_2432 0.43 +0.4 2,573,329 + Dshi_2432 0.43 +1.1 2,573,337 - Dshi_2432 0.44 -0.0 2,573,389 + Dshi_2432 0.49 -1.9 2,573,514 + Dshi_2432 0.62 +1.1 2,573,764 + Dshi_2432 0.87 +0.0 2,573,765 - Dshi_2432 0.87 +0.5 2,573,838 + +0.6 2,573,890 + -0.5 2,573,929 + +0.1 2,574,010 - -0.4 2,574,191 + Dshi_2433 0.19 +0.3 2,574,245 - Dshi_2433 0.22 -0.7 2,574,285 + Dshi_2433 0.25 -0.6 2,574,335 - Dshi_2433 0.28 -0.9 2,574,359 - Dshi_2433 0.30 -0.9 2,574,518 + Dshi_2433 0.40 -0.5 2,574,526 - Dshi_2433 0.41 +0.3 2,574,595 + Dshi_2433 0.45 +0.0 2,574,601 + Dshi_2433 0.46 -0.4 2,574,601 + Dshi_2433 0.46 -0.6 2,574,601 + Dshi_2433 0.46 +0.2 2,574,609 - Dshi_2433 0.46 -1.1 2,574,609 - Dshi_2433 0.46 -1.1 2,574,609 - Dshi_2433 0.46 -0.6 2,574,610 + Dshi_2433 0.46 -1.9 2,574,628 + Dshi_2433 0.47 +0.4 2,574,638 - Dshi_2433 0.48 -0.5 2,574,671 - Dshi_2433 0.50 -0.2 2,574,760 - Dshi_2433 0.56 +0.0 2,574,830 + Dshi_2433 0.61 +0.8 2,574,896 - Dshi_2433 0.65 -0.4 2,574,935 + Dshi_2433 0.67 -0.2 2,574,954 - Dshi_2433 0.69 -0.9 2,574,958 + Dshi_2433 0.69 -0.2 2,574,965 + Dshi_2433 0.69 -0.7 2,574,972 - Dshi_2433 0.70 +0.1 2,574,972 - Dshi_2433 0.70 -0.5 2,575,004 + Dshi_2433 0.72 -0.0 2,575,006 + Dshi_2433 0.72 +0.2 2,575,140 + Dshi_2433 0.81 -0.7 2,575,180 - Dshi_2433 0.83 -0.8 2,575,187 + Dshi_2433 0.84 -1.1 2,575,357 - +0.7 2,575,369 + +0.1 2,575,369 + -0.2 2,575,387 - -0.1 2,575,407 + -0.3 2,575,438 - +0.1 2,575,462 - +0.5 2,575,463 - +0.3 2,575,470 - -1.2 2,575,513 - +1.7 2,575,592 - +0.3 2,575,772 - Dshi_2434 0.26 +0.0 2,575,813 + Dshi_2434 0.31 +0.0 2,575,928 - Dshi_2434 0.42 +0.3 2,576,026 + Dshi_2434 0.52 +0.4 2,576,054 + Dshi_2434 0.55 -0.7 2,576,111 + Dshi_2434 0.60 -0.3 2,576,158 + Dshi_2434 0.65 +0.5 2,576,189 + Dshi_2434 0.68 -1.8 2,576,299 - Dshi_2434 0.79 +0.2 2,576,315 - Dshi_2434 0.81 -0.2 2,576,320 - Dshi_2434 0.81 -0.1 2,576,430 + +0.3
Or see this region's nucleotide sequence