Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2208 and Dshi_2209 are separated by 151 nucleotides Dshi_2209 and Dshi_2210 are separated by 158 nucleotides
Dshi_2208: Dshi_2208 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (RefSeq), at 2,333,780 to 2,335,267
_2208
Dshi_2209: Dshi_2209 - protein of unknown function DUF6 transmembrane (RefSeq), at 2,335,419 to 2,336,249
_2209
Dshi_2210: Dshi_2210 - hypothetical protein (RefSeq), at 2,336,408 to 2,338,699
_2210
Position (kb)
2335
2336
2337 Strain fitness (log2 ratio)
-1
0
1 at 2334.536 kb on - strand, within Dshi_2208 at 2334.553 kb on + strand, within Dshi_2208 at 2334.586 kb on + strand, within Dshi_2208 at 2334.652 kb on - strand, within Dshi_2208 at 2334.662 kb on + strand, within Dshi_2208 at 2334.702 kb on + strand, within Dshi_2208 at 2334.820 kb on - strand, within Dshi_2208 at 2335.035 kb on - strand, within Dshi_2208 at 2335.092 kb on - strand, within Dshi_2208 at 2335.111 kb on - strand, within Dshi_2208 at 2335.330 kb on + strand at 2335.330 kb on + strand at 2335.330 kb on + strand at 2335.338 kb on - strand at 2335.393 kb on + strand at 2335.394 kb on - strand at 2335.401 kb on - strand at 2335.482 kb on + strand at 2335.534 kb on + strand, within Dshi_2209 at 2335.539 kb on + strand, within Dshi_2209 at 2335.547 kb on - strand, within Dshi_2209 at 2335.631 kb on + strand, within Dshi_2209 at 2335.641 kb on + strand, within Dshi_2209 at 2335.656 kb on - strand, within Dshi_2209 at 2335.672 kb on - strand, within Dshi_2209 at 2335.793 kb on - strand, within Dshi_2209 at 2335.837 kb on + strand, within Dshi_2209 at 2335.885 kb on + strand, within Dshi_2209 at 2336.006 kb on - strand, within Dshi_2209 at 2336.016 kb on - strand, within Dshi_2209 at 2336.049 kb on + strand, within Dshi_2209 at 2336.050 kb on - strand, within Dshi_2209 at 2336.150 kb on - strand, within Dshi_2209 at 2336.184 kb on + strand at 2336.187 kb on - strand at 2336.187 kb on - strand at 2336.207 kb on + strand at 2336.279 kb on + strand at 2336.292 kb on - strand at 2336.374 kb on + strand at 2336.471 kb on - strand at 2336.485 kb on - strand at 2336.531 kb on + strand at 2336.703 kb on - strand, within Dshi_2210 at 2336.706 kb on + strand, within Dshi_2210 at 2336.715 kb on - strand, within Dshi_2210 at 2336.761 kb on + strand, within Dshi_2210 at 2336.848 kb on - strand, within Dshi_2210 at 2336.943 kb on + strand, within Dshi_2210 at 2336.943 kb on + strand, within Dshi_2210 at 2336.951 kb on - strand, within Dshi_2210 at 2337.000 kb on + strand, within Dshi_2210 at 2337.198 kb on + strand, within Dshi_2210 at 2337.229 kb on - strand, within Dshi_2210
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 2,334,536 - Dshi_2208 0.51 +1.3 2,334,553 + Dshi_2208 0.52 -0.3 2,334,586 + Dshi_2208 0.54 -0.4 2,334,652 - Dshi_2208 0.59 -0.2 2,334,662 + Dshi_2208 0.59 +0.0 2,334,702 + Dshi_2208 0.62 +0.2 2,334,820 - Dshi_2208 0.70 -0.6 2,335,035 - Dshi_2208 0.84 -0.0 2,335,092 - Dshi_2208 0.88 +0.5 2,335,111 - Dshi_2208 0.89 +0.0 2,335,330 + +0.3 2,335,330 + +0.4 2,335,330 + +0.2 2,335,338 - -1.5 2,335,393 + -0.6 2,335,394 - +0.0 2,335,401 - -0.0 2,335,482 + +1.4 2,335,534 + Dshi_2209 0.14 +1.0 2,335,539 + Dshi_2209 0.14 +0.3 2,335,547 - Dshi_2209 0.15 -0.1 2,335,631 + Dshi_2209 0.26 -0.7 2,335,641 + Dshi_2209 0.27 -1.5 2,335,656 - Dshi_2209 0.29 -0.1 2,335,672 - Dshi_2209 0.30 +0.4 2,335,793 - Dshi_2209 0.45 -0.4 2,335,837 + Dshi_2209 0.50 -0.3 2,335,885 + Dshi_2209 0.56 -1.0 2,336,006 - Dshi_2209 0.71 +0.4 2,336,016 - Dshi_2209 0.72 +0.2 2,336,049 + Dshi_2209 0.76 -0.7 2,336,050 - Dshi_2209 0.76 -0.2 2,336,150 - Dshi_2209 0.88 +0.4 2,336,184 + -0.3 2,336,187 - -0.5 2,336,187 - +0.7 2,336,207 + +0.6 2,336,279 + +0.8 2,336,292 - +0.5 2,336,374 + -0.6 2,336,471 - +0.2 2,336,485 - +0.4 2,336,531 + -0.0 2,336,703 - Dshi_2210 0.13 -0.3 2,336,706 + Dshi_2210 0.13 -0.2 2,336,715 - Dshi_2210 0.13 +0.7 2,336,761 + Dshi_2210 0.15 -0.4 2,336,848 - Dshi_2210 0.19 -1.4 2,336,943 + Dshi_2210 0.23 -1.2 2,336,943 + Dshi_2210 0.23 +0.3 2,336,951 - Dshi_2210 0.24 +0.0 2,337,000 + Dshi_2210 0.26 -0.4 2,337,198 + Dshi_2210 0.34 +0.1 2,337,229 - Dshi_2210 0.36 +0.1
Or see this region's nucleotide sequence