Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1765
Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Dimethyl Sulfoxide 5 vol% |
---|---|---|---|---|---|
remove | |||||
1,829,846 | + | +0.5 | |||
1,829,861 | + | -1.4 | |||
1,830,011 | + | Dshi_1764 | 0.13 | +0.2 | |
1,830,021 | + | Dshi_1764 | 0.15 | +0.9 | |
1,830,065 | + | Dshi_1764 | 0.20 | -0.1 | |
1,830,137 | + | Dshi_1764 | 0.30 | -0.4 | |
1,830,289 | - | Dshi_1764 | 0.49 | +0.4 | |
1,830,393 | - | Dshi_1764 | 0.62 | +0.9 | |
1,830,451 | + | Dshi_1764 | 0.69 | -0.6 | |
1,830,874 | + | +0.7 | |||
1,830,888 | + | Dshi_1765 | 0.11 | +0.5 | |
1,830,896 | - | Dshi_1765 | 0.11 | -0.7 | |
1,830,974 | + | Dshi_1765 | 0.15 | +0.6 | |
1,831,239 | + | Dshi_1765 | 0.30 | +1.3 | |
1,831,312 | - | Dshi_1765 | 0.34 | +0.5 | |
1,831,629 | - | Dshi_1765 | 0.51 | -0.1 | |
1,831,674 | + | Dshi_1765 | 0.54 | +0.3 | |
1,831,675 | + | Dshi_1765 | 0.54 | +0.7 | |
1,831,687 | - | Dshi_1765 | 0.54 | +0.1 | |
1,831,753 | + | Dshi_1765 | 0.58 | +0.3 | |
1,831,834 | + | Dshi_1765 | 0.62 | +1.0 | |
1,831,933 | - | Dshi_1765 | 0.68 | +0.9 | |
1,831,978 | - | Dshi_1765 | 0.70 | -0.2 | |
1,832,007 | + | Dshi_1765 | 0.72 | -0.8 | |
1,832,072 | - | Dshi_1765 | 0.75 | +0.2 | |
1,832,082 | - | Dshi_1765 | 0.76 | +0.5 | |
1,832,586 | - | -0.9 | |||
1,832,717 | + | -1.7 | |||
1,833,165 | - | Dshi_1766 | 0.37 | +0.3 | |
1,833,175 | - | Dshi_1766 | 0.37 | -0.8 | |
1,833,433 | - | Dshi_1766 | 0.53 | -0.9 |
Or see this region's nucleotide sequence