Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0674 and Dshi_0675 are separated by 154 nucleotides Dshi_0675 and Dshi_0676 are separated by 138 nucleotides
Dshi_0674: Dshi_0674 - Coproporphyrinogen oxidase (RefSeq), at 678,666 to 679,559
_0674
Dshi_0675: Dshi_0675 - gamma-glutamyltransferase (RefSeq), at 679,714 to 681,504
_0675
Dshi_0676: Dshi_0676 - beta-lactamase (RefSeq), at 681,643 to 683,742
_0676
Position (kb)
679
680
681
682 Strain fitness (log2 ratio)
-1
0
1
2 at 679.643 kb on - strand at 679.681 kb on + strand at 679.777 kb on - strand at 680.213 kb on - strand, within Dshi_0675 at 680.481 kb on + strand, within Dshi_0675 at 680.528 kb on - strand, within Dshi_0675 at 680.615 kb on - strand, within Dshi_0675 at 680.683 kb on - strand, within Dshi_0675 at 680.773 kb on - strand, within Dshi_0675 at 680.866 kb on + strand, within Dshi_0675 at 680.868 kb on - strand, within Dshi_0675 at 680.873 kb on - strand, within Dshi_0675 at 680.936 kb on - strand, within Dshi_0675 at 680.948 kb on + strand, within Dshi_0675 at 681.006 kb on + strand, within Dshi_0675 at 681.014 kb on - strand, within Dshi_0675 at 681.032 kb on + strand, within Dshi_0675 at 681.032 kb on + strand, within Dshi_0675 at 681.074 kb on - strand, within Dshi_0675 at 681.074 kb on - strand, within Dshi_0675 at 681.348 kb on + strand at 681.393 kb on - strand at 681.419 kb on + strand at 681.419 kb on + strand at 681.420 kb on - strand at 681.427 kb on - strand at 681.472 kb on - strand at 681.477 kb on + strand at 681.506 kb on - strand at 681.511 kb on - strand at 681.545 kb on - strand at 681.549 kb on + strand at 681.630 kb on + strand at 681.638 kb on - strand at 681.689 kb on - strand at 681.689 kb on - strand at 681.691 kb on + strand at 681.697 kb on + strand at 681.702 kb on + strand at 681.788 kb on + strand at 681.814 kb on - strand at 681.957 kb on + strand, within Dshi_0676 at 681.992 kb on + strand, within Dshi_0676 at 681.992 kb on + strand, within Dshi_0676 at 682.000 kb on - strand, within Dshi_0676 at 682.000 kb on - strand, within Dshi_0676 at 682.000 kb on - strand, within Dshi_0676 at 682.000 kb on - strand, within Dshi_0676 at 682.074 kb on + strand, within Dshi_0676 at 682.179 kb on - strand, within Dshi_0676 at 682.247 kb on - strand, within Dshi_0676 at 682.294 kb on - strand, within Dshi_0676 at 682.343 kb on - strand, within Dshi_0676
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 679,643 - -0.2 679,681 + -1.0 679,777 - +1.5 680,213 - Dshi_0675 0.28 +0.5 680,481 + Dshi_0675 0.43 +0.1 680,528 - Dshi_0675 0.45 +0.1 680,615 - Dshi_0675 0.50 +0.6 680,683 - Dshi_0675 0.54 -0.0 680,773 - Dshi_0675 0.59 +1.0 680,866 + Dshi_0675 0.64 -0.4 680,868 - Dshi_0675 0.64 +2.5 680,873 - Dshi_0675 0.65 +0.1 680,936 - Dshi_0675 0.68 +0.3 680,948 + Dshi_0675 0.69 -0.3 681,006 + Dshi_0675 0.72 +0.9 681,014 - Dshi_0675 0.73 +0.4 681,032 + Dshi_0675 0.74 +0.1 681,032 + Dshi_0675 0.74 -0.7 681,074 - Dshi_0675 0.76 +1.1 681,074 - Dshi_0675 0.76 +0.4 681,348 + +0.9 681,393 - -0.5 681,419 + +0.7 681,419 + -0.2 681,420 - -0.9 681,427 - -0.3 681,472 - -0.0 681,477 + -0.3 681,506 - +0.6 681,511 - +1.9 681,545 - -0.6 681,549 + +0.2 681,630 + -0.9 681,638 - +0.5 681,689 - +1.4 681,689 - -1.1 681,691 + +0.5 681,697 + -0.6 681,702 + -0.4 681,788 + -0.2 681,814 - -0.7 681,957 + Dshi_0676 0.15 +0.1 681,992 + Dshi_0676 0.17 +0.2 681,992 + Dshi_0676 0.17 -0.7 682,000 - Dshi_0676 0.17 +0.4 682,000 - Dshi_0676 0.17 +0.4 682,000 - Dshi_0676 0.17 -0.4 682,000 - Dshi_0676 0.17 -1.2 682,074 + Dshi_0676 0.21 -0.1 682,179 - Dshi_0676 0.26 +0.3 682,247 - Dshi_0676 0.29 +0.8 682,294 - Dshi_0676 0.31 -0.7 682,343 - Dshi_0676 0.33 +0.3
Or see this region's nucleotide sequence