Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06236 and H281DRAFT_06237 overlap by 4 nucleotides H281DRAFT_06237 and H281DRAFT_06238 overlap by 4 nucleotides H281DRAFT_06238 and H281DRAFT_06239 overlap by 4 nucleotides
H281DRAFT_06236: H281DRAFT_06236 - UDP-N-acetylmuramoylalanine--D-glutamate ligase, at 16,287 to 17,801
_06236
H281DRAFT_06237: H281DRAFT_06237 - cell division-specific peptidoglycan biosynthesis regulator FtsW, at 17,798 to 19,066
_06237
H281DRAFT_06238: H281DRAFT_06238 - hypothetical protein, at 19,063 to 19,191
_06238
H281DRAFT_06239: H281DRAFT_06239 - UDP-N-acetylglucosamine-N-acetylmuramylpentapeptide N-acetylglucosamine transferase, at 19,188 to 20,306
_06239
Position (kb) 17
18
19
20 Strain fitness (log2 ratio) -1
0
1 at 17.764 kb on + strand at 17.797 kb on + strand at 17.797 kb on + strand at 17.797 kb on + strand at 17.942 kb on + strand, within H281DRAFT_06237 at 19.062 kb on + strand at 19.062 kb on + strand at 19.062 kb on + strand at 19.101 kb on + strand, within H281DRAFT_06238 at 19.187 kb on + strand at 19.187 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 17,764 + -0.2 17,797 + +0.2 17,797 + -0.2 17,797 + -0.1 17,942 + H281DRAFT_06237 0.11 +0.5 19,062 + +0.7 19,062 + -1.3 19,062 + -0.2 19,101 + H281DRAFT_06238 0.29 -0.3 19,187 + +0.5 19,187 + +0.3
Or see this region's nucleotide sequence