Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03102 and H281DRAFT_03103 are separated by 166 nucleotides H281DRAFT_03103 and H281DRAFT_03104 are separated by 132 nucleotides H281DRAFT_03104 and H281DRAFT_03105 are separated by 195 nucleotides
H281DRAFT_03102: H281DRAFT_03102 - cyclopropane-fatty-acyl-phospholipid synthase, at 136,484 to 137,830
_03102
H281DRAFT_03103: H281DRAFT_03103 - hypothetical protein, at 137,997 to 139,049
_03103
H281DRAFT_03104: H281DRAFT_03104 - hypothetical protein, at 139,182 to 139,541
_03104
H281DRAFT_03105: H281DRAFT_03105 - Signal transduction histidine kinase, at 139,737 to 141,896
_03105
Position (kb) 137
138
139
140 Strain fitness (log2 ratio) -1
0
1 at 137.215 kb on + strand, within H281DRAFT_03102 at 137.448 kb on + strand, within H281DRAFT_03102 at 137.640 kb on + strand, within H281DRAFT_03102 at 137.640 kb on + strand, within H281DRAFT_03102 at 137.641 kb on - strand, within H281DRAFT_03102 at 137.949 kb on + strand at 138.062 kb on + strand at 138.101 kb on - strand at 138.136 kb on - strand, within H281DRAFT_03103 at 138.143 kb on + strand, within H281DRAFT_03103 at 138.331 kb on - strand, within H281DRAFT_03103 at 138.405 kb on - strand, within H281DRAFT_03103 at 138.684 kb on + strand, within H281DRAFT_03103 at 138.801 kb on + strand, within H281DRAFT_03103 at 138.838 kb on + strand, within H281DRAFT_03103 at 139.181 kb on + strand at 139.262 kb on + strand, within H281DRAFT_03104 at 139.646 kb on - strand at 139.677 kb on + strand at 139.793 kb on + strand at 139.794 kb on - strand at 139.830 kb on - strand at 140.018 kb on + strand, within H281DRAFT_03105
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 137,215 + H281DRAFT_03102 0.54 -0.4 137,448 + H281DRAFT_03102 0.72 -0.5 137,640 + H281DRAFT_03102 0.86 -0.3 137,640 + H281DRAFT_03102 0.86 +0.1 137,641 - H281DRAFT_03102 0.86 +0.2 137,949 + -0.8 138,062 + +0.8 138,101 - +0.2 138,136 - H281DRAFT_03103 0.13 +0.3 138,143 + H281DRAFT_03103 0.14 +0.9 138,331 - H281DRAFT_03103 0.32 +1.0 138,405 - H281DRAFT_03103 0.39 +0.9 138,684 + H281DRAFT_03103 0.65 -1.0 138,801 + H281DRAFT_03103 0.76 +0.4 138,838 + H281DRAFT_03103 0.80 +0.0 139,181 + +0.4 139,262 + H281DRAFT_03104 0.22 +0.5 139,646 - +0.4 139,677 + +0.4 139,793 + +0.6 139,794 - -0.2 139,830 - +0.2 140,018 + H281DRAFT_03105 0.13 -0.2
Or see this region's nucleotide sequence