Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00735 and H281DRAFT_00736 are separated by 154 nucleotides H281DRAFT_00736 and H281DRAFT_00737 are separated by 134 nucleotides
H281DRAFT_00735: H281DRAFT_00735 - Glycosyltransferases involved in cell wall biogenesis, at 830,833 to 831,798
_00735
H281DRAFT_00736: H281DRAFT_00736 - Lysophospholipase, at 831,953 to 833,845
_00736
H281DRAFT_00737: H281DRAFT_00737 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 833,980 to 834,849
_00737
H281DRAFT_00738: H281DRAFT_00738 - NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family, at 834,824 to 835,441
_00738
Position (kb) 831
832
833
834 Strain fitness (log2 ratio) -1
0
1 at 831.704 kb on - strand at 831.848 kb on + strand at 831.849 kb on - strand at 832.040 kb on + strand at 832.467 kb on - strand, within H281DRAFT_00736 at 832.844 kb on + strand, within H281DRAFT_00736 at 832.988 kb on - strand, within H281DRAFT_00736 at 833.166 kb on - strand, within H281DRAFT_00736 at 834.064 kb on - strand at 834.210 kb on + strand, within H281DRAFT_00737 at 834.410 kb on - strand, within H281DRAFT_00737
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 831,704 - +1.3 831,848 + +0.0 831,849 - +0.4 832,040 + -0.1 832,467 - H281DRAFT_00736 0.27 +0.3 832,844 + H281DRAFT_00736 0.47 +0.1 832,988 - H281DRAFT_00736 0.55 +1.6 833,166 - H281DRAFT_00736 0.64 +0.3 834,064 - +0.4 834,210 + H281DRAFT_00737 0.26 -0.0 834,410 - H281DRAFT_00737 0.49 +0.3
Or see this region's nucleotide sequence