Experiment: L-Cysteine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24125 and BWI76_RS24130 are separated by 46 nucleotides BWI76_RS24130 and BWI76_RS24135 overlap by 1 nucleotides BWI76_RS24135 and BWI76_RS24140 are separated by 48 nucleotides BWI76_RS24140 and BWI76_RS24145 are separated by 50 nucleotides
BWI76_RS24125: BWI76_RS24125 - hypothetical protein, at 5,031,101 to 5,032,087
_RS24125
BWI76_RS24130: BWI76_RS24130 - small integral C4-dicarboxylate membrane transporter, at 5,032,134 to 5,032,637
_RS24130
BWI76_RS24135: BWI76_RS24135 - c4-dicarboxylate permease, at 5,032,637 to 5,033,938
_RS24135
BWI76_RS24140: BWI76_RS24140 - hypothetical protein, at 5,033,987 to 5,034,706
_RS24140
BWI76_RS24145: BWI76_RS24145 - hypothetical protein, at 5,034,757 to 5,035,083
_RS24145
Position (kb) 5032
5033
5034 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5031.641 kb on - strand at 5031.641 kb on - strand, within BWI76_RS24125 at 5031.641 kb on - strand, within BWI76_RS24125 at 5031.651 kb on - strand, within BWI76_RS24125 at 5031.696 kb on - strand, within BWI76_RS24125 at 5031.713 kb on + strand, within BWI76_RS24125 at 5031.779 kb on - strand, within BWI76_RS24125 at 5031.852 kb on + strand, within BWI76_RS24125 at 5031.949 kb on + strand, within BWI76_RS24125 at 5032.082 kb on + strand at 5032.203 kb on + strand, within BWI76_RS24130 at 5032.395 kb on - strand, within BWI76_RS24130 at 5032.395 kb on - strand, within BWI76_RS24130 at 5032.451 kb on - strand, within BWI76_RS24130 at 5032.467 kb on - strand, within BWI76_RS24130 at 5032.504 kb on - strand, within BWI76_RS24130 at 5032.526 kb on - strand, within BWI76_RS24130 at 5032.541 kb on - strand, within BWI76_RS24130 at 5032.644 kb on + strand at 5032.734 kb on + strand at 5032.898 kb on - strand, within BWI76_RS24135 at 5032.900 kb on + strand, within BWI76_RS24135 at 5032.900 kb on + strand, within BWI76_RS24135 at 5032.908 kb on - strand, within BWI76_RS24135 at 5032.908 kb on - strand, within BWI76_RS24135 at 5032.977 kb on - strand, within BWI76_RS24135 at 5033.093 kb on - strand, within BWI76_RS24135 at 5033.172 kb on - strand, within BWI76_RS24135 at 5033.606 kb on - strand, within BWI76_RS24135 at 5033.608 kb on + strand, within BWI76_RS24135 at 5033.706 kb on - strand, within BWI76_RS24135 at 5033.746 kb on + strand, within BWI76_RS24135 at 5033.875 kb on + strand at 5033.953 kb on - strand at 5034.022 kb on + strand at 5034.022 kb on + strand at 5034.030 kb on - strand at 5034.030 kb on - strand at 5034.272 kb on - strand, within BWI76_RS24140 at 5034.306 kb on - strand, within BWI76_RS24140 at 5034.306 kb on - strand, within BWI76_RS24140 at 5034.467 kb on - strand, within BWI76_RS24140 at 5034.515 kb on + strand, within BWI76_RS24140 at 5034.631 kb on + strand, within BWI76_RS24140 at 5034.849 kb on - strand, within BWI76_RS24145
Per-strain Table
Position Strand Gene LocusTag Fraction L-Cysteine (N) remove 5,031,641 - -0.0 5,031,641 - BWI76_RS24125 0.55 +0.3 5,031,641 - BWI76_RS24125 0.55 +2.2 5,031,651 - BWI76_RS24125 0.56 +0.6 5,031,696 - BWI76_RS24125 0.60 -0.4 5,031,713 + BWI76_RS24125 0.62 -0.4 5,031,779 - BWI76_RS24125 0.69 -0.1 5,031,852 + BWI76_RS24125 0.76 -1.6 5,031,949 + BWI76_RS24125 0.86 +0.4 5,032,082 + +0.5 5,032,203 + BWI76_RS24130 0.14 +0.4 5,032,395 - BWI76_RS24130 0.52 -2.5 5,032,395 - BWI76_RS24130 0.52 +1.0 5,032,451 - BWI76_RS24130 0.63 +0.2 5,032,467 - BWI76_RS24130 0.66 -1.6 5,032,504 - BWI76_RS24130 0.73 +0.3 5,032,526 - BWI76_RS24130 0.78 -0.5 5,032,541 - BWI76_RS24130 0.81 -0.8 5,032,644 + -0.6 5,032,734 + -2.0 5,032,898 - BWI76_RS24135 0.20 -0.6 5,032,900 + BWI76_RS24135 0.20 +1.4 5,032,900 + BWI76_RS24135 0.20 +0.8 5,032,908 - BWI76_RS24135 0.21 +0.7 5,032,908 - BWI76_RS24135 0.21 -1.3 5,032,977 - BWI76_RS24135 0.26 -2.4 5,033,093 - BWI76_RS24135 0.35 +1.6 5,033,172 - BWI76_RS24135 0.41 -0.2 5,033,606 - BWI76_RS24135 0.74 +1.0 5,033,608 + BWI76_RS24135 0.75 +0.0 5,033,706 - BWI76_RS24135 0.82 +1.7 5,033,746 + BWI76_RS24135 0.85 +1.5 5,033,875 + +0.6 5,033,953 - +0.4 5,034,022 + -0.3 5,034,022 + +0.2 5,034,030 - +0.5 5,034,030 - -2.8 5,034,272 - BWI76_RS24140 0.40 -1.5 5,034,306 - BWI76_RS24140 0.44 +0.1 5,034,306 - BWI76_RS24140 0.44 -0.7 5,034,467 - BWI76_RS24140 0.67 +0.4 5,034,515 + BWI76_RS24140 0.73 -0.8 5,034,631 + BWI76_RS24140 0.89 -0.4 5,034,849 - BWI76_RS24145 0.28 -1.4
Or see this region's nucleotide sequence