Experiment: L-Cysteine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18265 and BWI76_RS18270 are separated by 46 nucleotides BWI76_RS18270 and BWI76_RS18275 are separated by 371 nucleotides BWI76_RS18275 and BWI76_RS18280 are separated by 47 nucleotides
BWI76_RS18265: BWI76_RS18265 - MFS transporter, at 3,795,745 to 3,797,307
_RS18265
BWI76_RS18270: BWI76_RS18270 - hypothetical protein, at 3,797,354 to 3,797,605
_RS18270
BWI76_RS18275: BWI76_RS18275 - MFS transporter, at 3,797,977 to 3,799,401
_RS18275
BWI76_RS18280: BWI76_RS18280 - hypothetical protein, at 3,799,449 to 3,800,087
_RS18280
Position (kb)
3797
3798
3799
3800 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3797.154 kb on + strand at 3797.431 kb on + strand, within BWI76_RS18270 at 3797.761 kb on + strand at 3797.922 kb on + strand at 3797.922 kb on + strand at 3797.925 kb on - strand at 3797.925 kb on - strand at 3797.930 kb on - strand at 3797.949 kb on - strand at 3798.093 kb on - strand at 3798.299 kb on - strand, within BWI76_RS18275 at 3798.398 kb on + strand, within BWI76_RS18275 at 3798.403 kb on + strand at 3798.411 kb on - strand, within BWI76_RS18275 at 3798.562 kb on + strand, within BWI76_RS18275 at 3798.570 kb on - strand, within BWI76_RS18275 at 3798.701 kb on + strand, within BWI76_RS18275 at 3798.787 kb on - strand, within BWI76_RS18275 at 3799.023 kb on - strand, within BWI76_RS18275 at 3799.181 kb on - strand, within BWI76_RS18275 at 3799.184 kb on + strand, within BWI76_RS18275 at 3799.184 kb on + strand, within BWI76_RS18275 at 3799.229 kb on + strand, within BWI76_RS18275 at 3799.259 kb on + strand at 3799.351 kb on + strand at 3799.369 kb on + strand at 3799.411 kb on - strand at 3799.466 kb on - strand at 3799.548 kb on - strand, within BWI76_RS18280 at 3799.635 kb on + strand, within BWI76_RS18280 at 3799.637 kb on + strand, within BWI76_RS18280 at 3799.730 kb on + strand, within BWI76_RS18280 at 3799.745 kb on - strand, within BWI76_RS18280 at 3799.771 kb on + strand, within BWI76_RS18280 at 3799.941 kb on + strand, within BWI76_RS18280 at 3799.949 kb on - strand, within BWI76_RS18280 at 3799.961 kb on - strand, within BWI76_RS18280 at 3800.096 kb on + strand at 3800.098 kb on + strand at 3800.098 kb on + strand at 3800.098 kb on + strand at 3800.098 kb on + strand at 3800.106 kb on - strand at 3800.106 kb on - strand at 3800.106 kb on - strand at 3800.106 kb on - strand at 3800.106 kb on - strand at 3800.106 kb on - strand at 3800.106 kb on - strand at 3800.144 kb on - strand at 3800.234 kb on - strand at 3800.254 kb on - strand at 3800.257 kb on - strand at 3800.257 kb on - strand at 3800.266 kb on + strand at 3800.266 kb on + strand at 3800.266 kb on + strand at 3800.267 kb on - strand at 3800.271 kb on + strand at 3800.272 kb on - strand at 3800.274 kb on - strand at 3800.275 kb on + strand at 3800.275 kb on + strand at 3800.287 kb on - strand at 3800.306 kb on - strand at 3800.306 kb on - strand at 3800.312 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Cysteine (N) remove 3,797,154 + -0.1 3,797,431 + BWI76_RS18270 0.31 +0.5 3,797,761 + +0.1 3,797,922 + -0.0 3,797,922 + +1.7 3,797,925 - +0.3 3,797,925 - +0.2 3,797,930 - -2.5 3,797,949 - -0.3 3,798,093 - +0.5 3,798,299 - BWI76_RS18275 0.23 -0.7 3,798,398 + BWI76_RS18275 0.30 -0.3 3,798,403 + +1.9 3,798,411 - BWI76_RS18275 0.30 +2.4 3,798,562 + BWI76_RS18275 0.41 +0.5 3,798,570 - BWI76_RS18275 0.42 +0.6 3,798,701 + BWI76_RS18275 0.51 +1.8 3,798,787 - BWI76_RS18275 0.57 +0.4 3,799,023 - BWI76_RS18275 0.73 +0.4 3,799,181 - BWI76_RS18275 0.84 +1.4 3,799,184 + BWI76_RS18275 0.85 -0.5 3,799,184 + BWI76_RS18275 0.85 +0.3 3,799,229 + BWI76_RS18275 0.88 +0.8 3,799,259 + +0.1 3,799,351 + -0.8 3,799,369 + +0.4 3,799,411 - +0.0 3,799,466 - +0.1 3,799,548 - BWI76_RS18280 0.15 +0.6 3,799,635 + BWI76_RS18280 0.29 +0.1 3,799,637 + BWI76_RS18280 0.29 -0.0 3,799,730 + BWI76_RS18280 0.44 -0.8 3,799,745 - BWI76_RS18280 0.46 +0.7 3,799,771 + BWI76_RS18280 0.50 -1.1 3,799,941 + BWI76_RS18280 0.77 +0.4 3,799,949 - BWI76_RS18280 0.78 +0.1 3,799,961 - BWI76_RS18280 0.80 +0.8 3,800,096 + +2.6 3,800,098 + -0.0 3,800,098 + -0.1 3,800,098 + +1.9 3,800,098 + +2.2 3,800,106 - +0.3 3,800,106 - -0.3 3,800,106 - +1.0 3,800,106 - -1.8 3,800,106 - +1.0 3,800,106 - -0.7 3,800,106 - -2.8 3,800,144 - -0.8 3,800,234 - +1.2 3,800,254 - +0.6 3,800,257 - -0.1 3,800,257 - +0.1 3,800,266 + -0.4 3,800,266 + +0.1 3,800,266 + +0.9 3,800,267 - -0.2 3,800,271 + +0.2 3,800,272 - -3.6 3,800,274 - +0.4 3,800,275 + -0.1 3,800,275 + -1.1 3,800,287 - +0.6 3,800,306 - +0.6 3,800,306 - +0.7 3,800,312 + -1.7
Or see this region's nucleotide sequence