Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16755

Experiment: L-Cysteine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16750 and BWI76_RS16755 are separated by 23 nucleotidesBWI76_RS16755 and BWI76_RS16760 are separated by 57 nucleotides BWI76_RS16750: BWI76_RS16750 - acetolactate synthase, at 3,469,262 to 3,470,941 _RS16750 BWI76_RS16755: BWI76_RS16755 - acetoin reductase, at 3,470,965 to 3,471,735 _RS16755 BWI76_RS16760: BWI76_RS16760 - lipase, at 3,471,793 to 3,472,863 _RS16760 Position (kb) 3470 3471 3472Strain fitness (log2 ratio) -2 -1 0 1at 3469.998 kb on - strand, within BWI76_RS16750at 3470.542 kb on - strand, within BWI76_RS16750at 3470.625 kb on - strand, within BWI76_RS16750at 3470.627 kb on + strand, within BWI76_RS16750at 3470.662 kb on + strand, within BWI76_RS16750at 3470.746 kb on + strand, within BWI76_RS16750at 3470.925 kb on - strandat 3471.142 kb on - strand, within BWI76_RS16755at 3471.229 kb on - strand, within BWI76_RS16755at 3471.754 kb on - strandat 3471.859 kb on - strandat 3471.966 kb on - strand, within BWI76_RS16760at 3471.970 kb on - strand, within BWI76_RS16760at 3472.087 kb on - strand, within BWI76_RS16760at 3472.494 kb on + strandat 3472.540 kb on - strand, within BWI76_RS16760at 3472.540 kb on - strand, within BWI76_RS16760at 3472.611 kb on + strand, within BWI76_RS16760

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Cysteine (N)
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3,469,998 - BWI76_RS16750 0.44 +0.5
3,470,542 - BWI76_RS16750 0.76 +0.9
3,470,625 - BWI76_RS16750 0.81 +0.6
3,470,627 + BWI76_RS16750 0.81 +0.9
3,470,662 + BWI76_RS16750 0.83 +0.3
3,470,746 + BWI76_RS16750 0.88 +0.5
3,470,925 - -0.1
3,471,142 - BWI76_RS16755 0.23 +0.4
3,471,229 - BWI76_RS16755 0.34 +0.2
3,471,754 - +0.2
3,471,859 - -0.1
3,471,966 - BWI76_RS16760 0.16 +0.3
3,471,970 - BWI76_RS16760 0.17 -0.2
3,472,087 - BWI76_RS16760 0.27 +1.0
3,472,494 + +0.9
3,472,540 - BWI76_RS16760 0.70 -2.3
3,472,540 - BWI76_RS16760 0.70 -1.1
3,472,611 + BWI76_RS16760 0.76 -0.4

Or see this region's nucleotide sequence