Experiment: L-Cysteine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14210 and BWI76_RS14215 are separated by 235 nucleotides BWI76_RS14215 and BWI76_RS14220 are separated by 21 nucleotides BWI76_RS14220 and BWI76_RS14225 are separated by 53 nucleotides BWI76_RS14225 and BWI76_RS14230 overlap by 1 nucleotides
BWI76_RS14210: BWI76_RS14210 - LysR family transcriptional regulator, at 2,974,662 to 2,975,624
_RS14210
BWI76_RS14215: BWI76_RS14215 - hypothetical protein, at 2,975,860 to 2,976,141
_RS14215
BWI76_RS14220: BWI76_RS14220 - hypothetical protein, at 2,976,163 to 2,976,504
_RS14220
BWI76_RS14225: BWI76_RS14225 - anti-ECF sigma factor ChrR, at 2,976,558 to 2,977,229
_RS14225
BWI76_RS14230: BWI76_RS14230 - flavin monoamine oxidase family protein, at 2,977,229 to 2,978,218
_RS14230
Position (kb)
2976
2977
2978 Strain fitness (log2 ratio)
-2
-1
0
1 at 2975.969 kb on + strand, within BWI76_RS14215 at 2975.970 kb on - strand, within BWI76_RS14215 at 2975.998 kb on - strand, within BWI76_RS14215 at 2976.025 kb on - strand, within BWI76_RS14215 at 2976.097 kb on + strand, within BWI76_RS14215 at 2976.097 kb on + strand, within BWI76_RS14215 at 2976.110 kb on + strand, within BWI76_RS14215 at 2976.123 kb on + strand at 2976.133 kb on - strand at 2976.672 kb on + strand, within BWI76_RS14225 at 2976.680 kb on - strand, within BWI76_RS14225 at 2977.381 kb on + strand, within BWI76_RS14230 at 2977.774 kb on + strand, within BWI76_RS14230 at 2977.774 kb on + strand, within BWI76_RS14230 at 2977.818 kb on - strand, within BWI76_RS14230 at 2977.994 kb on + strand, within BWI76_RS14230
Per-strain Table
Position Strand Gene LocusTag Fraction L-Cysteine (N) remove 2,975,969 + BWI76_RS14215 0.39 -1.4 2,975,970 - BWI76_RS14215 0.39 +0.6 2,975,998 - BWI76_RS14215 0.49 -0.6 2,976,025 - BWI76_RS14215 0.59 +0.8 2,976,097 + BWI76_RS14215 0.84 +0.3 2,976,097 + BWI76_RS14215 0.84 +0.4 2,976,110 + BWI76_RS14215 0.89 +0.5 2,976,123 + +0.8 2,976,133 - +0.3 2,976,672 + BWI76_RS14225 0.17 +0.7 2,976,680 - BWI76_RS14225 0.18 +1.4 2,977,381 + BWI76_RS14230 0.15 +0.6 2,977,774 + BWI76_RS14230 0.55 +0.1 2,977,774 + BWI76_RS14230 0.55 +0.6 2,977,818 - BWI76_RS14230 0.59 -1.2 2,977,994 + BWI76_RS14230 0.77 -2.3
Or see this region's nucleotide sequence