Experiment: L-Cysteine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04560 and BWI76_RS04565 are separated by 81 nucleotides BWI76_RS04565 and BWI76_RS04570 are separated by 12 nucleotides BWI76_RS04570 and BWI76_RS04575 are separated by 187 nucleotides
BWI76_RS04560: BWI76_RS04560 - holo-ACP synthase CitX, at 945,490 to 946,029
_RS04560
BWI76_RS04565: BWI76_RS04565 - bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA, at 946,111 to 946,770
_RS04565
BWI76_RS04570: BWI76_RS04570 - RNA polymerase-associated protein RapA, at 946,783 to 949,689
_RS04570
BWI76_RS04575: BWI76_RS04575 - DNA polymerase II, at 949,877 to 952,234
_RS04575
Position (kb) 946
947
948
949
950 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 945.809 kb on - strand, within BWI76_RS04560 at 946.053 kb on - strand at 946.098 kb on - strand at 946.108 kb on - strand at 946.342 kb on + strand, within BWI76_RS04565 at 946.398 kb on + strand, within BWI76_RS04565 at 946.407 kb on + strand, within BWI76_RS04565 at 946.474 kb on - strand, within BWI76_RS04565 at 946.543 kb on + strand, within BWI76_RS04565 at 946.554 kb on + strand, within BWI76_RS04565 at 947.054 kb on + strand at 947.054 kb on + strand at 947.129 kb on - strand, within BWI76_RS04570 at 947.349 kb on + strand, within BWI76_RS04570 at 947.595 kb on - strand at 947.824 kb on + strand, within BWI76_RS04570 at 948.289 kb on - strand, within BWI76_RS04570 at 948.550 kb on - strand, within BWI76_RS04570 at 948.641 kb on + strand, within BWI76_RS04570 at 948.695 kb on - strand, within BWI76_RS04570 at 948.784 kb on - strand, within BWI76_RS04570 at 948.965 kb on - strand, within BWI76_RS04570 at 948.970 kb on + strand, within BWI76_RS04570 at 949.017 kb on + strand, within BWI76_RS04570 at 949.025 kb on - strand, within BWI76_RS04570 at 949.520 kb on + strand at 949.766 kb on - strand at 949.800 kb on - strand at 949.939 kb on - strand at 949.988 kb on - strand at 950.031 kb on + strand at 950.082 kb on + strand at 950.143 kb on + strand, within BWI76_RS04575 at 950.162 kb on + strand, within BWI76_RS04575 at 950.170 kb on - strand, within BWI76_RS04575 at 950.210 kb on - strand, within BWI76_RS04575 at 950.339 kb on - strand, within BWI76_RS04575 at 950.463 kb on + strand, within BWI76_RS04575 at 950.463 kb on - strand, within BWI76_RS04575
Per-strain Table
Position Strand Gene LocusTag Fraction L-Cysteine (N) remove 945,809 - BWI76_RS04560 0.59 -1.4 946,053 - +0.7 946,098 - +1.1 946,108 - -1.7 946,342 + BWI76_RS04565 0.35 +0.1 946,398 + BWI76_RS04565 0.43 -1.1 946,407 + BWI76_RS04565 0.45 +1.2 946,474 - BWI76_RS04565 0.55 +0.4 946,543 + BWI76_RS04565 0.65 +0.1 946,554 + BWI76_RS04565 0.67 +0.5 947,054 + +1.1 947,054 + -3.2 947,129 - BWI76_RS04570 0.12 -1.7 947,349 + BWI76_RS04570 0.19 -1.0 947,595 - -1.0 947,824 + BWI76_RS04570 0.36 -2.4 948,289 - BWI76_RS04570 0.52 -3.4 948,550 - BWI76_RS04570 0.61 -0.6 948,641 + BWI76_RS04570 0.64 -1.7 948,695 - BWI76_RS04570 0.66 -0.2 948,784 - BWI76_RS04570 0.69 -2.9 948,965 - BWI76_RS04570 0.75 -2.7 948,970 + BWI76_RS04570 0.75 -0.7 949,017 + BWI76_RS04570 0.77 +0.6 949,025 - BWI76_RS04570 0.77 -0.4 949,520 + -0.6 949,766 - -0.2 949,800 - -0.1 949,939 - -0.7 949,988 - +0.7 950,031 + +0.6 950,082 + +0.7 950,143 + BWI76_RS04575 0.11 +1.3 950,162 + BWI76_RS04575 0.12 +0.4 950,170 - BWI76_RS04575 0.12 +0.5 950,210 - BWI76_RS04575 0.14 +1.8 950,339 - BWI76_RS04575 0.20 +0.6 950,463 + BWI76_RS04575 0.25 +0.3 950,463 - BWI76_RS04575 0.25 +0.2
Or see this region's nucleotide sequence