Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003133

Experiment: 2,3-dihydroxybenzoic and Ethanols

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,3-dihydroxybenzoic and Ethanols
3,543,098	-		ABIE53_003131	0.81	-1.1
3,543,368	+				+1.5
3,543,369	-				+0.1
3,543,372	+				-0.0
3,543,375	-				-0.5
3,543,383	+				-0.2
3,543,415	+				+0.5
3,543,415	+				-2.6
3,543,416	-				-0.3
3,543,478	+		ABIE53_003132	0.13	-0.4
3,543,478	+		ABIE53_003132	0.13	-1.0
3,543,478	+		ABIE53_003132	0.13	-1.4
3,543,478	+		ABIE53_003132	0.13	-1.4
3,543,478	+		ABIE53_003132	0.13	+2.2
3,543,478	+		ABIE53_003132	0.13	-0.4
3,543,478	+		ABIE53_003132	0.13	-2.1
3,543,478	+		ABIE53_003132	0.13	-1.0
3,543,478	+		ABIE53_003132	0.13	+0.3
3,543,478	+		ABIE53_003132	0.13	-0.8
3,543,479	-		ABIE53_003132	0.13	-1.2
3,543,479	-		ABIE53_003132	0.13	+0.9
3,543,479	-		ABIE53_003132	0.13	-0.8
3,543,479	-		ABIE53_003132	0.13	+1.2
3,543,479	-		ABIE53_003132	0.13	-0.7
3,543,479	-		ABIE53_003132	0.13	-0.9
3,543,479	-		ABIE53_003132	0.13	-1.0
3,543,533	+		ABIE53_003132	0.24	-1.8
3,543,533	+		ABIE53_003132	0.24	-0.4
3,543,533	+		ABIE53_003132	0.24	-0.8
3,543,533	+		ABIE53_003132	0.24	-2.6
3,543,533	+		ABIE53_003132	0.24	+0.2
3,543,534	-		ABIE53_003132	0.24	+0.1
3,543,539	-		ABIE53_003132	0.25	+0.5
3,543,539	-		ABIE53_003132	0.25	-0.5
3,543,539	-		ABIE53_003132	0.25	-1.1
3,543,539	-		ABIE53_003132	0.25	+0.0
3,543,575	-		ABIE53_003132	0.32	-0.4
3,543,733	+		ABIE53_003132	0.64	-0.5
3,543,733	+		ABIE53_003132	0.64	+0.1
3,543,733	+		ABIE53_003132	0.64	-1.1
3,543,733	+		ABIE53_003132	0.64	-0.8
3,543,733	+		ABIE53_003132	0.64	-1.3
3,543,733	+		ABIE53_003132	0.64	-3.0
3,543,733	+		ABIE53_003132	0.64	-1.6
3,543,733	+		ABIE53_003132	0.64	+0.2
3,543,734	-		ABIE53_003132	0.64	-0.4
3,543,734	-		ABIE53_003132	0.64	-0.4
3,543,734	-		ABIE53_003132	0.64	-0.8
3,543,734	-		ABIE53_003132	0.64	-0.6
3,543,734	-		ABIE53_003132	0.64	+0.6
3,543,734	-		ABIE53_003132	0.64	-1.1
3,543,734	-		ABIE53_003132	0.64	-0.1
3,543,734	-		ABIE53_003132	0.64	-0.6
3,543,734	-		ABIE53_003132	0.64	-0.8
3,543,734	-		ABIE53_003132	0.64	-1.7
3,543,736	+		ABIE53_003132	0.64	-0.6
3,543,736	+		ABIE53_003132	0.64	-1.4
3,543,736	+		ABIE53_003132	0.64	-0.6
3,543,737	-		ABIE53_003132	0.64	+0.4
3,543,737	-		ABIE53_003132	0.64	-0.1
3,543,737	-		ABIE53_003132	0.64	-1.1
3,543,737	-		ABIE53_003132	0.64	-0.7
3,543,737	-		ABIE53_003132	0.64	-0.1
3,543,947	-				+1.0
3,543,970	+				+0.2
3,543,971	-				-0.4
3,543,971	-				-0.9
3,544,079	+				+0.0
3,544,079	+				-0.4
3,544,079	+				-1.0
3,544,079	+				-0.9
3,544,079	+				+1.2
3,544,080	-				+1.2
3,544,080	-				+0.2
3,544,080	-				-1.9
3,544,117	+				-1.1
3,544,128	+				-1.2
3,544,128	+				-1.5
3,544,128	+				-0.2
3,544,128	+				-0.4
3,544,128	+				-0.3
3,544,128	+				-1.2
3,544,128	+				-0.8
3,544,128	+				-0.5
3,544,129	-				-0.9
3,544,129	-				-1.6
3,544,129	-				+0.0
3,544,129	-				-3.3
3,544,129	-				+0.6
3,544,129	-				+1.2
3,544,131	+				-1.1
3,544,131	+				-0.3
3,544,131	+				-0.1
3,544,131	+				-1.3
3,544,131	+				-0.1
3,544,131	+				+1.0
3,544,131	+				-0.2
3,544,131	+				+0.6
3,544,132	-				+0.2
3,544,132	-				+2.5
3,544,132	-				-1.9
3,544,230	+		ABIE53_003133	0.12	-0.2
3,544,231	-		ABIE53_003133	0.12	-0.8
3,544,231	-		ABIE53_003133	0.12	-1.3
3,544,231	-		ABIE53_003133	0.12	-1.1
3,544,231	-		ABIE53_003133	0.12	-2.9
3,544,231	-		ABIE53_003133	0.12	-0.1
3,544,231	-		ABIE53_003133	0.12	-0.9
3,544,381	-		ABIE53_003133	0.23	-0.8
3,544,381	-		ABIE53_003133	0.23	-1.9
3,544,419	+		ABIE53_003133	0.26	+0.6
3,544,420	-		ABIE53_003133	0.26	-0.9
3,544,468	-		ABIE53_003133	0.30	-1.2
3,544,468	-		ABIE53_003133	0.30	+1.2
3,544,498	+		ABIE53_003133	0.32	-0.8
3,544,498	+		ABIE53_003133	0.32	+1.3
3,544,498	+		ABIE53_003133	0.32	-1.0
3,544,499	-		ABIE53_003133	0.33	-0.8
3,544,737	+		ABIE53_003133	0.51	+0.1
3,544,737	+		ABIE53_003133	0.51	-0.4
3,544,737	+		ABIE53_003133	0.51	-1.8
3,544,737	+		ABIE53_003133	0.51	-0.2
3,544,737	+		ABIE53_003133	0.51	-2.1
3,544,738	-		ABIE53_003133	0.51	-0.4
3,544,810	+		ABIE53_003133	0.57	-0.4
3,544,811	-		ABIE53_003133	0.57	-1.4
3,544,845	+		ABIE53_003133	0.59	-0.9
3,544,845	+		ABIE53_003133	0.59	-0.7
3,544,903	-		ABIE53_003133	0.64	-0.8
3,544,903	-		ABIE53_003133	0.64	+0.2
3,544,968	+		ABIE53_003133	0.69	-0.1
3,544,968	+		ABIE53_003133	0.69	+0.4
3,544,968	+		ABIE53_003133	0.69	-0.4
3,544,968	+		ABIE53_003133	0.69	+0.1
3,544,968	+		ABIE53_003133	0.69	-0.6
3,544,968	+		ABIE53_003133	0.69	+0.5
3,544,968	+		ABIE53_003133	0.69	-0.5
3,544,969	-		ABIE53_003133	0.69	+0.4
3,544,969	-		ABIE53_003133	0.69	-1.9
3,544,969	-		ABIE53_003133	0.69	-2.2
3,544,982	+		ABIE53_003133	0.70	-0.1
3,545,322	+				-0.5
3,545,322	+				+0.6
3,545,323	-				+0.5
3,545,358	+				-1.1
3,545,359	-				-0.3
3,545,359	-				+1.2
3,545,359	-				-0.7
3,545,373	+				+1.8
3,545,373	+				+0.8
3,545,373	+				-0.5
3,545,374	-				-0.8
3,545,374	-				+0.2
3,545,416	+				+1.2
3,545,416	+				-0.6
3,545,416	+				-0.6
3,545,416	+				-0.7
3,545,416	+				-0.2
3,545,416	+				-0.1
3,545,417	-				-0.8
3,545,417	-				+2.2
3,545,508	-				-0.4
3,545,664	+				-1.3
3,545,664	+				-2.0
3,545,664	+				-0.7
3,545,664	+				+0.4
3,545,665	-				+0.1
3,545,665	-				+0.5
3,545,695	-				+1.0
3,545,695	-				-0.9
3,545,787	+		ABIE53_003134	0.12	-1.4
3,545,787	+		ABIE53_003134	0.12	+1.7
3,545,787	+		ABIE53_003134	0.12	-0.6
3,545,787	+		ABIE53_003134	0.12	+0.1
3,545,788	-		ABIE53_003134	0.13	-0.9
3,545,788	-		ABIE53_003134	0.13	-1.9
3,545,788	-		ABIE53_003134	0.13	-0.7
3,545,886	+		ABIE53_003134	0.18	-0.8
3,545,886	+		ABIE53_003134	0.18	+0.2
3,545,886	+		ABIE53_003134	0.18	-1.1
3,545,887	-		ABIE53_003134	0.18	-0.3
3,545,887	-		ABIE53_003134	0.18	+0.2
3,545,887	-		ABIE53_003134	0.18	-0.8
3,546,042	+		ABIE53_003134	0.27	-2.6
3,546,042	+		ABIE53_003134	0.27	+0.1
3,546,042	+		ABIE53_003134	0.27	+0.5
3,546,042	+		ABIE53_003134	0.27	+1.0
3,546,042	+		ABIE53_003134	0.27	+0.6
3,546,042	+		ABIE53_003134	0.27	-1.6
3,546,043	-		ABIE53_003134	0.27	-0.6
3,546,043	-		ABIE53_003134	0.27	-0.7
3,546,043	-		ABIE53_003134	0.27	-0.5
3,546,043	-		ABIE53_003134	0.27	+0.4
3,546,043	-		ABIE53_003134	0.27	-1.4
3,546,072	+		ABIE53_003134	0.28	-0.0
3,546,072	+		ABIE53_003134	0.28	+1.1
3,546,073	-		ABIE53_003134	0.28	-1.5
3,546,073	-		ABIE53_003134	0.28	+0.0
3,546,073	-		ABIE53_003134	0.28	-0.8
3,546,073	-		ABIE53_003134	0.28	+0.5
3,546,073	-		ABIE53_003134	0.28	-0.2
3,546,073	-		ABIE53_003134	0.28	+0.4
3,546,073	-		ABIE53_003134	0.28	+1.0
3,546,137	+		ABIE53_003134	0.32	-0.8
3,546,137	+		ABIE53_003134	0.32	-0.2
3,546,138	-		ABIE53_003134	0.32	+0.2
3,546,138	-		ABIE53_003134	0.32	-0.9
3,546,138	-		ABIE53_003134	0.32	-0.4
3,546,138	-		ABIE53_003134	0.32	+3.5
3,546,173	+		ABIE53_003134	0.34	-2.1
3,546,192	+		ABIE53_003134	0.35	-0.8
3,546,193	-		ABIE53_003134	0.35	-0.0
3,546,193	-		ABIE53_003134	0.35	+0.7
3,546,193	-		ABIE53_003134	0.35	-0.1
3,546,267	+		ABIE53_003134	0.39	-0.9
3,546,267	+		ABIE53_003134	0.39	+0.3
3,546,267	+		ABIE53_003134	0.39	+0.6
3,546,267	+		ABIE53_003134	0.39	-1.1
3,546,267	+		ABIE53_003134	0.39	-0.6
3,546,267	+		ABIE53_003134	0.39	+0.1
3,546,267	+		ABIE53_003134	0.39	+0.0
3,546,267	+		ABIE53_003134	0.39	+1.2
3,546,268	-		ABIE53_003134	0.39	+1.0
3,546,268	-		ABIE53_003134	0.39	-0.8
3,546,268	-		ABIE53_003134	0.39	-0.8
3,546,268	-		ABIE53_003134	0.39	+0.8
3,546,268	-		ABIE53_003134	0.39	+0.1
3,546,268	-		ABIE53_003134	0.39	+0.6
3,546,268	-		ABIE53_003134	0.39	+0.1
3,546,268	-		ABIE53_003134	0.39	-0.3
3,546,268	-		ABIE53_003134	0.39	-0.8