Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003128

Experiment: 2,3-dihydroxybenzoic and Ethanols

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2,3-dihydroxybenzoic and Ethanols
3,538,706	-				+0.2
3,538,706	-				+0.2
3,538,728	-				+0.6
3,538,728	-				+0.2
3,538,728	-				+0.9
3,538,728	-				-0.4
3,538,728	-				+0.0
3,538,728	-				-0.4
3,538,728	-				+0.0
3,538,734	-				+0.5
3,539,453	-				+2.2
3,539,453	-				+0.5
3,539,603	-				+0.9
3,539,603	-				+0.1
3,539,603	-				+0.3
3,539,616	-				-0.4
3,539,616	-				-0.3
3,539,622	-				+1.5
3,539,622	-				+0.4
3,539,622	-				-0.4
3,539,622	-				+0.5
3,539,622	-				+0.2
3,539,622	-				+1.2
3,539,622	-				-1.0
3,539,622	-				+0.5
3,540,237	+		ABIE53_003129	0.16	+1.5
3,540,237	+		ABIE53_003129	0.16	-0.0
3,540,237	+		ABIE53_003129	0.16	+0.1
3,540,260	+		ABIE53_003129	0.18	+0.8
3,540,260	+		ABIE53_003129	0.18	-2.2
3,540,260	+		ABIE53_003129	0.18	+0.2
3,540,261	-		ABIE53_003129	0.19	+0.2
3,540,261	-		ABIE53_003129	0.19	+0.2
3,540,304	+		ABIE53_003129	0.22	-0.5
3,540,304	+		ABIE53_003129	0.22	+1.1
3,540,304	+		ABIE53_003129	0.22	-0.5
3,540,304	+		ABIE53_003129	0.22	+0.6
3,540,304	+		ABIE53_003129	0.22	-1.1
3,540,304	+		ABIE53_003129	0.22	-0.3
3,540,304	+		ABIE53_003129	0.22	-0.0
3,540,304	+		ABIE53_003129	0.22	+0.2
3,540,304	+		ABIE53_003129	0.22	+2.0
3,540,304	+		ABIE53_003129	0.22	+0.2
3,540,304	+		ABIE53_003129	0.22	+0.1
3,540,305	-		ABIE53_003129	0.22	+0.1
3,540,305	-		ABIE53_003129	0.22	+0.2
3,540,305	-		ABIE53_003129	0.22	+1.6
3,540,305	-		ABIE53_003129	0.22	+0.2
3,540,305	-		ABIE53_003129	0.22	-0.5
3,540,305	-		ABIE53_003129	0.22	+1.2
3,540,305	-		ABIE53_003129	0.22	-0.2
3,540,305	-		ABIE53_003129	0.22	-0.3
3,540,305	-		ABIE53_003129	0.22	-0.2
3,540,305	-		ABIE53_003129	0.22	+0.9
3,540,305	-		ABIE53_003129	0.22	-0.9
3,540,305	-		ABIE53_003129	0.22	+2.2
3,540,306	+		ABIE53_003129	0.22	-1.9
3,540,306	+		ABIE53_003129	0.22	+0.0
3,540,306	+		ABIE53_003129	0.22	-1.0
3,540,306	+		ABIE53_003129	0.22	+0.0
3,540,306	+		ABIE53_003129	0.22	+1.8
3,540,306	+		ABIE53_003129	0.22	-1.4
3,540,307	-		ABIE53_003129	0.22	+0.7
3,540,307	-		ABIE53_003129	0.22	+1.4
3,540,307	-		ABIE53_003129	0.22	+2.0
3,540,307	-		ABIE53_003129	0.22	-1.4
3,540,307	-		ABIE53_003129	0.22	-0.8
3,540,307	-		ABIE53_003129	0.22	+0.4
3,540,308	+		ABIE53_003129	0.22	+1.2
3,540,308	+		ABIE53_003129	0.22	+0.0
3,540,308	+		ABIE53_003129	0.22	-0.4
3,540,308	+		ABIE53_003129	0.22	-1.4
3,540,308	+		ABIE53_003129	0.22	+0.6
3,540,308	+		ABIE53_003129	0.22	+0.1
3,540,308	+		ABIE53_003129	0.22	-1.9
3,540,308	+		ABIE53_003129	0.22	-0.2
3,540,308	+		ABIE53_003129	0.22	-1.9
3,540,308	+		ABIE53_003129	0.22	-1.1
3,540,308	+		ABIE53_003129	0.22	-1.1
3,540,308	+		ABIE53_003129	0.22	+0.5
3,540,308	+		ABIE53_003129	0.22	+0.5
3,540,308	+		ABIE53_003129	0.22	-0.1
3,540,308	+		ABIE53_003129	0.22	+1.0
3,540,308	+		ABIE53_003129	0.22	-0.7
3,540,308	+		ABIE53_003129	0.22	-0.4
3,540,308	+		ABIE53_003129	0.22	-0.1
3,540,308	+		ABIE53_003129	0.22	-0.1
3,540,309	-		ABIE53_003129	0.23	-0.0
3,540,309	-		ABIE53_003129	0.23	-0.0
3,540,309	-		ABIE53_003129	0.23	-0.6
3,540,309	-		ABIE53_003129	0.23	-0.2
3,540,309	-		ABIE53_003129	0.23	+0.2
3,540,309	-		ABIE53_003129	0.23	-0.4
3,540,309	-		ABIE53_003129	0.23	-0.1
3,540,309	-		ABIE53_003129	0.23	+0.6
3,540,309	-		ABIE53_003129	0.23	-0.9
3,540,309	-		ABIE53_003129	0.23	-1.1
3,540,309	-		ABIE53_003129	0.23	+0.6
3,540,309	-		ABIE53_003129	0.23	-0.0
3,540,309	-		ABIE53_003129	0.23	+0.0
3,540,309	-		ABIE53_003129	0.23	+0.2
3,540,309	-		ABIE53_003129	0.23	-0.6
3,540,309	-		ABIE53_003129	0.23	+0.6
3,540,309	-		ABIE53_003129	0.23	+0.9
3,540,309	-		ABIE53_003129	0.23	+0.3
3,540,309	-		ABIE53_003129	0.23	+0.8
3,540,309	-		ABIE53_003129	0.23	-0.2
3,540,309	-		ABIE53_003129	0.23	-0.8
3,540,309	-		ABIE53_003129	0.23	-1.9
3,540,309	-		ABIE53_003129	0.23	-2.2
3,540,309	-		ABIE53_003129	0.23	+1.0
3,540,309	-		ABIE53_003129	0.23	+1.2
3,540,309	-		ABIE53_003129	0.23	+0.3
3,540,331	+		ABIE53_003129	0.24	-0.8
3,540,331	+		ABIE53_003129	0.24	+1.5
3,540,331	+		ABIE53_003129	0.24	-0.3
3,540,331	+		ABIE53_003129	0.24	+0.1
3,540,331	+		ABIE53_003129	0.24	+0.0
3,540,331	+		ABIE53_003129	0.24	-0.0
3,540,331	+		ABIE53_003129	0.24	+0.7
3,540,331	+		ABIE53_003129	0.24	-1.2
3,540,332	-		ABIE53_003129	0.24	-0.7
3,540,332	-		ABIE53_003129	0.24	-0.9
3,540,332	-		ABIE53_003129	0.24	+0.6
3,540,332	-		ABIE53_003129	0.24	+1.8
3,540,372	+		ABIE53_003129	0.28	-0.1
3,540,372	+		ABIE53_003129	0.28	+1.2
3,540,372	+		ABIE53_003129	0.28	+0.7
3,540,372	+		ABIE53_003129	0.28	+0.5
3,540,372	+		ABIE53_003129	0.28	-0.1
3,540,372	+		ABIE53_003129	0.28	-1.1
3,540,372	+		ABIE53_003129	0.28	-1.4
3,540,372	+		ABIE53_003129	0.28	+1.2
3,540,372	+		ABIE53_003129	0.28	-0.4
3,540,372	+		ABIE53_003129	0.28	+0.8
3,540,372	+		ABIE53_003129	0.28	-0.8
3,540,372	+		ABIE53_003129	0.28	+0.4
3,540,372	+		ABIE53_003129	0.28	-1.3
3,540,372	+		ABIE53_003129	0.28	+1.2
3,540,372	+		ABIE53_003129	0.28	-1.4
3,540,372	+		ABIE53_003129	0.28	-0.7
3,540,373	-		ABIE53_003129	0.28	-1.6
3,540,373	-		ABIE53_003129	0.28	+0.1
3,540,373	-		ABIE53_003129	0.28	-1.4
3,540,373	-		ABIE53_003129	0.28	-0.3
3,540,373	-		ABIE53_003129	0.28	-0.1
3,540,373	-		ABIE53_003129	0.28	-0.4
3,540,373	-		ABIE53_003129	0.28	-0.0
3,540,373	-		ABIE53_003129	0.28	-0.4
3,540,373	-		ABIE53_003129	0.28	-0.4
3,540,373	-		ABIE53_003129	0.28	-0.8
3,540,373	-		ABIE53_003129	0.28	+0.4
3,540,373	-		ABIE53_003129	0.28	+0.3
3,540,373	-		ABIE53_003129	0.28	+0.7
3,540,373	-		ABIE53_003129	0.28	+0.2
3,540,373	-		ABIE53_003129	0.28	+0.2
3,540,373	-		ABIE53_003129	0.28	-1.9
3,540,373	-		ABIE53_003129	0.28	-0.7
3,540,373	-		ABIE53_003129	0.28	-0.0
3,540,374	-		ABIE53_003129	0.28	+0.2
3,540,430	+		ABIE53_003129	0.33	-0.3
3,540,430	+		ABIE53_003129	0.33	+0.1
3,540,430	+		ABIE53_003129	0.33	+0.6
3,540,430	+		ABIE53_003129	0.33	+0.1
3,540,430	+		ABIE53_003129	0.33	+1.1
3,540,430	+		ABIE53_003129	0.33	-0.1
3,540,430	+		ABIE53_003129	0.33	+0.0
3,540,430	+		ABIE53_003129	0.33	+0.5
3,540,431	-		ABIE53_003129	0.33	-0.7
3,540,431	-		ABIE53_003129	0.33	+2.0
3,540,431	-		ABIE53_003129	0.33	-0.9
3,540,431	-		ABIE53_003129	0.33	-0.3
3,540,431	-		ABIE53_003129	0.33	-2.2
3,540,431	-		ABIE53_003129	0.33	-0.4
3,540,455	+		ABIE53_003129	0.35	+0.2
3,540,580	+		ABIE53_003129	0.45	+1.4
3,540,580	+		ABIE53_003129	0.45	+3.5
3,540,580	+		ABIE53_003129	0.45	+1.4
3,540,580	+		ABIE53_003129	0.45	+0.4
3,540,580	+		ABIE53_003129	0.45	+0.1
3,540,580	+		ABIE53_003129	0.45	+0.5
3,540,581	-		ABIE53_003129	0.45	+0.0
3,540,581	-		ABIE53_003129	0.45	+0.2
3,540,581	-		ABIE53_003129	0.45	+0.1
3,540,581	-		ABIE53_003129	0.45	+1.3
3,540,581	-		ABIE53_003129	0.45	+0.4
3,540,581	-		ABIE53_003129	0.45	+0.4
3,540,581	-		ABIE53_003129	0.45	+1.5
3,540,581	-		ABIE53_003129	0.45	+0.4
3,540,581	-		ABIE53_003129	0.45	-0.2
3,540,670	+		ABIE53_003129	0.53	+0.1
3,540,670	+		ABIE53_003129	0.53	+0.8
3,540,670	+		ABIE53_003129	0.53	+2.5
3,540,670	+		ABIE53_003129	0.53	+0.2
3,540,671	-		ABIE53_003129	0.53	+1.9
3,540,671	-		ABIE53_003129	0.53	+0.0
3,540,671	-		ABIE53_003129	0.53	+0.2
3,540,671	-		ABIE53_003129	0.53	+0.1
3,540,692	+		ABIE53_003129	0.55	+0.2
3,540,692	+		ABIE53_003129	0.55	-1.4
3,540,692	+		ABIE53_003129	0.55	-0.2
3,540,692	+		ABIE53_003129	0.55	+0.0
3,540,692	+		ABIE53_003129	0.55	+2.5
3,540,693	-		ABIE53_003129	0.55	+0.4
3,540,693	-		ABIE53_003129	0.55	-0.1
3,540,693	-		ABIE53_003129	0.55	+0.8
3,540,693	-		ABIE53_003129	0.55	-0.4
3,540,693	-		ABIE53_003129	0.55	-0.9
3,540,767	+		ABIE53_003129	0.61	-0.7
3,540,768	-		ABIE53_003129	0.61	-0.0
3,540,779	+		ABIE53_003129	0.62	-1.0
3,540,779	+		ABIE53_003129	0.62	+1.1
3,540,779	+		ABIE53_003129	0.62	+0.5
3,540,780	-		ABIE53_003129	0.62	-0.4
3,540,780	-		ABIE53_003129	0.62	+1.8
3,540,780	-		ABIE53_003129	0.62	-0.5
3,540,780	-		ABIE53_003129	0.62	-1.9
3,540,835	+		ABIE53_003129	0.67	-0.2
3,540,836	-		ABIE53_003129	0.67	+1.2