Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2953

Experiment: m.b. Fusidic 0.0006 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_2951 and Dshi_2952 are separated by 6 nucleotidesDshi_2952 and Dshi_2953 overlap by 4 nucleotidesDshi_2953 and Dshi_2954 overlap by 4 nucleotides Dshi_2951: Dshi_2951 - Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq), at 3,112,137 to 3,113,279 _2951 Dshi_2952: Dshi_2952 - pantoate--beta-alanine ligase (RefSeq), at 3,113,286 to 3,114,131 _2952 Dshi_2953: Dshi_2953 - ATP phosphoribosyltransferase (RefSeq), at 3,114,128 to 3,114,847 _2953 Dshi_2954: Dshi_2954 - tRNA synthetase class II (G H P and S) (RefSeq), at 3,114,844 to 3,115,950 _2954 Position (kb) 3114 3115Strain fitness (log2 ratio) -1 0 1at 3113.264 kb on + strandat 3113.288 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0006 mg/ml
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3,113,264 + -1.6
3,113,288 + -1.4

Or see this region's nucleotide sequence