Experiment: MoYLS4 with FCCP 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0454 and DVU0455 are separated by 49 nucleotides DVU0455 and DVU0456 are separated by 21 nucleotides DVU0456 and DVU0457 are separated by 155 nucleotides
DVU0454: DVU0454 - hypothetical protein (TIGR), at 522,863 to 523,111
DVU0454
DVU0455: DVU0455 - hypothetical protein (TIGR), at 523,161 to 523,928
DVU0455
DVU0456: DVU0456 - DHH family protein (TIGR), at 523,950 to 524,957
DVU0456
DVU0457: DVU0457 - EAL domain protein (TIGR), at 525,113 to 526,363
DVU0457
Position (kb) 523
524
525 Strain fitness (log2 ratio) -2
-1
0
1
2 at 522.967 kb on - strand, within DVU0454 at 522.972 kb on - strand, within DVU0454 at 523.022 kb on - strand, within DVU0454 at 523.022 kb on - strand, within DVU0454 at 523.159 kb on - strand at 523.159 kb on - strand at 523.161 kb on - strand at 523.166 kb on - strand at 523.198 kb on - strand at 523.210 kb on - strand at 523.210 kb on - strand at 523.210 kb on - strand at 523.210 kb on - strand at 523.406 kb on + strand, within DVU0455 at 523.493 kb on - strand, within DVU0455 at 523.505 kb on - strand, within DVU0455 at 523.507 kb on - strand, within DVU0455 at 523.577 kb on + strand, within DVU0455 at 523.629 kb on - strand, within DVU0455 at 523.676 kb on + strand, within DVU0455 at 523.676 kb on + strand, within DVU0455 at 523.715 kb on + strand, within DVU0455 at 523.765 kb on + strand, within DVU0455 at 523.765 kb on + strand, within DVU0455 at 523.792 kb on + strand, within DVU0455 at 523.868 kb on - strand at 523.991 kb on + strand at 524.020 kb on + strand at 524.191 kb on - strand, within DVU0456 at 524.191 kb on - strand, within DVU0456 at 524.215 kb on + strand, within DVU0456 at 524.241 kb on + strand, within DVU0456 at 524.270 kb on - strand, within DVU0456 at 524.312 kb on - strand, within DVU0456 at 524.396 kb on + strand, within DVU0456 at 524.404 kb on - strand, within DVU0456 at 524.425 kb on - strand, within DVU0456 at 524.539 kb on - strand, within DVU0456 at 524.555 kb on + strand, within DVU0456 at 524.564 kb on + strand, within DVU0456 at 524.564 kb on + strand, within DVU0456 at 524.572 kb on - strand, within DVU0456 at 524.572 kb on - strand, within DVU0456 at 524.622 kb on - strand, within DVU0456 at 524.836 kb on - strand, within DVU0456 at 524.843 kb on - strand, within DVU0456 at 524.884 kb on - strand at 524.951 kb on + strand at 524.951 kb on + strand at 524.990 kb on - strand at 525.079 kb on + strand at 525.079 kb on + strand at 525.171 kb on - strand at 525.196 kb on - strand at 525.324 kb on + strand, within DVU0457 at 525.327 kb on + strand, within DVU0457 at 525.490 kb on + strand, within DVU0457 at 525.570 kb on + strand, within DVU0457 at 525.571 kb on - strand, within DVU0457 at 525.586 kb on - strand, within DVU0457 at 525.640 kb on - strand, within DVU0457 at 525.661 kb on - strand, within DVU0457 at 525.661 kb on - strand, within DVU0457
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with FCCP 10uM remove 522,967 - DVU0454 0.42 +0.1 522,972 - DVU0454 0.44 -0.6 523,022 - DVU0454 0.64 +1.0 523,022 - DVU0454 0.64 -0.2 523,159 - -0.0 523,159 - +0.0 523,161 - -0.3 523,166 - -0.5 523,198 - +1.9 523,210 - -0.2 523,210 - +1.0 523,210 - -0.2 523,210 - -0.5 523,406 + DVU0455 0.32 +0.5 523,493 - DVU0455 0.43 -1.5 523,505 - DVU0455 0.45 -0.5 523,507 - DVU0455 0.45 +2.1 523,577 + DVU0455 0.54 -0.1 523,629 - DVU0455 0.61 -0.1 523,676 + DVU0455 0.67 -2.6 523,676 + DVU0455 0.67 -0.3 523,715 + DVU0455 0.72 -0.5 523,765 + DVU0455 0.79 +1.1 523,765 + DVU0455 0.79 +0.9 523,792 + DVU0455 0.82 -0.5 523,868 - +0.7 523,991 + -1.0 524,020 + -1.1 524,191 - DVU0456 0.24 +0.2 524,191 - DVU0456 0.24 -1.2 524,215 + DVU0456 0.26 -1.5 524,241 + DVU0456 0.29 -1.2 524,270 - DVU0456 0.32 -1.7 524,312 - DVU0456 0.36 -1.3 524,396 + DVU0456 0.44 -1.2 524,404 - DVU0456 0.45 -1.5 524,425 - DVU0456 0.47 -1.3 524,539 - DVU0456 0.58 -1.3 524,555 + DVU0456 0.60 -1.1 524,564 + DVU0456 0.61 -0.5 524,564 + DVU0456 0.61 -2.5 524,572 - DVU0456 0.62 +0.5 524,572 - DVU0456 0.62 +0.1 524,622 - DVU0456 0.67 -1.8 524,836 - DVU0456 0.88 -1.3 524,843 - DVU0456 0.89 -1.5 524,884 - -0.8 524,951 + +0.1 524,951 + +0.1 524,990 - -0.1 525,079 + -0.4 525,079 + +1.4 525,171 - -0.0 525,196 - -0.2 525,324 + DVU0457 0.17 +0.0 525,327 + DVU0457 0.17 -0.0 525,490 + DVU0457 0.30 +1.5 525,570 + DVU0457 0.37 -0.4 525,571 - DVU0457 0.37 -0.7 525,586 - DVU0457 0.38 -0.5 525,640 - DVU0457 0.42 -0.9 525,661 - DVU0457 0.44 -0.8 525,661 - DVU0457 0.44 +0.0
Or see this region's nucleotide sequence