Experiment: D-Trehalose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_692 and HP15_693 overlap by 7 nucleotides HP15_693 and HP15_694 overlap by 1 nucleotides HP15_694 and HP15_695 overlap by 20 nucleotides HP15_695 and HP15_696 overlap by 7 nucleotides HP15_696 and HP15_697 overlap by 1 nucleotides HP15_697 and HP15_698 overlap by 1 nucleotides
HP15_692: HP15_692 - phage protein, at 706,257 to 706,877
_692
HP15_693: HP15_693 - hypothetical protein, at 706,871 to 707,218
_693
HP15_694: HP15_694 - conserved hypothetical protein, at 707,218 to 707,478
_694
HP15_695: HP15_695 - conserved hypothetical protein, at 707,459 to 707,650
_695
HP15_696: HP15_696 - conserved hypothetical protein, at 707,644 to 707,871
_696
HP15_697: HP15_697 - conserved hypothetical protein, at 707,871 to 708,542
_697
HP15_698: HP15_698 - conserved hypothetical protein, at 708,542 to 708,838
_698
Position (kb) 707
708 Strain fitness (log2 ratio) -2
-1
0
1
2 at 706.507 kb on - strand, within HP15_692 at 706.658 kb on - strand, within HP15_692 at 706.725 kb on - strand, within HP15_692 at 707.071 kb on - strand, within HP15_693 at 707.121 kb on - strand, within HP15_693 at 707.149 kb on - strand, within HP15_693 at 707.209 kb on - strand at 707.394 kb on - strand, within HP15_694 at 707.443 kb on - strand, within HP15_694 at 707.457 kb on - strand at 707.480 kb on - strand, within HP15_695 at 707.545 kb on - strand, within HP15_695 at 707.580 kb on - strand, within HP15_695 at 707.592 kb on - strand, within HP15_695 at 707.643 kb on - strand at 707.726 kb on + strand, within HP15_696 at 707.779 kb on - strand, within HP15_696 at 707.834 kb on - strand, within HP15_696 at 707.853 kb on - strand at 707.871 kb on - strand at 707.873 kb on - strand at 707.979 kb on - strand, within HP15_697 at 708.037 kb on - strand, within HP15_697 at 708.116 kb on - strand, within HP15_697 at 708.165 kb on + strand, within HP15_697 at 708.241 kb on + strand, within HP15_697 at 708.402 kb on - strand, within HP15_697 at 708.434 kb on - strand, within HP15_697 at 708.489 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose remove 706,507 - HP15_692 0.40 +0.9 706,658 - HP15_692 0.65 +0.3 706,725 - HP15_692 0.75 +1.3 707,071 - HP15_693 0.57 -2.1 707,121 - HP15_693 0.72 -0.7 707,149 - HP15_693 0.80 +0.2 707,209 - +1.2 707,394 - HP15_694 0.67 -0.9 707,443 - HP15_694 0.86 -0.9 707,457 - +0.3 707,480 - HP15_695 0.11 +0.5 707,545 - HP15_695 0.45 -0.7 707,580 - HP15_695 0.63 -1.1 707,592 - HP15_695 0.69 -0.6 707,643 - +1.5 707,726 + HP15_696 0.36 +1.5 707,779 - HP15_696 0.59 -1.1 707,834 - HP15_696 0.83 +1.3 707,853 - -1.1 707,871 - +0.2 707,873 - +1.9 707,979 - HP15_697 0.16 +0.9 708,037 - HP15_697 0.25 -0.3 708,116 - HP15_697 0.36 -0.1 708,165 + HP15_697 0.44 +1.7 708,241 + HP15_697 0.55 +0.0 708,402 - HP15_697 0.79 +0.6 708,434 - HP15_697 0.84 +0.9 708,489 - -0.7
Or see this region's nucleotide sequence