Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2543 and Dshi_2544 overlap by 1 nucleotides Dshi_2544 and Dshi_2545 overlap by 4 nucleotides Dshi_2545 and Dshi_2546 overlap by 8 nucleotides
Dshi_2543: Dshi_2543 - NMT1/THI5 like domain protein (RefSeq), at 2,699,475 to 2,700,533
_2543
Dshi_2544: Dshi_2544 - ABC transporter related (RefSeq), at 2,700,533 to 2,701,342
_2544
Dshi_2545: Dshi_2545 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 2,701,339 to 2,702,202
_2545
Dshi_2546: Dshi_2546 - Malate/L-lactate dehydrogenase (RefSeq), at 2,702,195 to 2,703,250
_2546
Position (kb)
2700
2701
2702 Strain fitness (log2 ratio)
-2
-1
0
1 at 2699.618 kb on + strand, within Dshi_2543 at 2699.618 kb on + strand, within Dshi_2543 at 2699.618 kb on + strand, within Dshi_2543 at 2699.626 kb on - strand, within Dshi_2543 at 2699.626 kb on - strand, within Dshi_2543 at 2699.633 kb on + strand, within Dshi_2543 at 2699.659 kb on + strand, within Dshi_2543 at 2699.688 kb on + strand, within Dshi_2543 at 2699.820 kb on + strand, within Dshi_2543 at 2699.874 kb on + strand, within Dshi_2543 at 2699.974 kb on + strand, within Dshi_2543 at 2700.142 kb on + strand, within Dshi_2543 at 2700.209 kb on + strand, within Dshi_2543 at 2700.216 kb on + strand, within Dshi_2543 at 2700.216 kb on + strand, within Dshi_2543 at 2700.240 kb on + strand, within Dshi_2543 at 2700.248 kb on - strand, within Dshi_2543 at 2700.321 kb on - strand, within Dshi_2543 at 2700.328 kb on - strand, within Dshi_2543 at 2700.344 kb on + strand, within Dshi_2543 at 2700.344 kb on + strand, within Dshi_2543 at 2700.362 kb on - strand, within Dshi_2543 at 2700.398 kb on - strand, within Dshi_2543 at 2700.398 kb on - strand, within Dshi_2543 at 2700.409 kb on - strand, within Dshi_2543 at 2700.413 kb on + strand, within Dshi_2543 at 2700.448 kb on - strand at 2700.463 kb on + strand at 2700.473 kb on - strand at 2700.605 kb on + strand at 2700.651 kb on + strand, within Dshi_2544 at 2700.661 kb on + strand, within Dshi_2544 at 2700.661 kb on + strand, within Dshi_2544 at 2700.679 kb on - strand, within Dshi_2544 at 2700.680 kb on - strand, within Dshi_2544 at 2700.743 kb on - strand, within Dshi_2544 at 2700.743 kb on - strand, within Dshi_2544 at 2700.747 kb on + strand, within Dshi_2544 at 2700.748 kb on - strand, within Dshi_2544 at 2700.755 kb on - strand, within Dshi_2544 at 2700.852 kb on - strand, within Dshi_2544 at 2700.921 kb on + strand, within Dshi_2544 at 2700.929 kb on - strand, within Dshi_2544 at 2700.929 kb on - strand, within Dshi_2544 at 2700.964 kb on + strand, within Dshi_2544 at 2700.964 kb on + strand, within Dshi_2544 at 2700.972 kb on - strand, within Dshi_2544 at 2701.004 kb on + strand, within Dshi_2544 at 2701.022 kb on - strand, within Dshi_2544 at 2701.098 kb on - strand, within Dshi_2544 at 2701.124 kb on + strand, within Dshi_2544 at 2701.170 kb on + strand, within Dshi_2544 at 2701.174 kb on + strand, within Dshi_2544 at 2701.178 kb on - strand, within Dshi_2544 at 2701.206 kb on - strand, within Dshi_2544 at 2701.241 kb on + strand, within Dshi_2544 at 2701.241 kb on + strand, within Dshi_2544 at 2701.249 kb on - strand, within Dshi_2544 at 2701.328 kb on + strand at 2701.336 kb on + strand at 2701.361 kb on + strand at 2701.402 kb on + strand at 2701.433 kb on + strand, within Dshi_2545 at 2701.535 kb on + strand, within Dshi_2545 at 2701.551 kb on - strand, within Dshi_2545 at 2701.567 kb on - strand, within Dshi_2545 at 2701.577 kb on - strand, within Dshi_2545 at 2701.579 kb on + strand, within Dshi_2545 at 2701.597 kb on + strand, within Dshi_2545 at 2701.684 kb on + strand, within Dshi_2545 at 2701.715 kb on - strand, within Dshi_2545 at 2701.742 kb on - strand, within Dshi_2545 at 2701.745 kb on + strand, within Dshi_2545 at 2701.788 kb on + strand, within Dshi_2545 at 2701.892 kb on - strand, within Dshi_2545 at 2701.912 kb on - strand, within Dshi_2545 at 2701.925 kb on + strand, within Dshi_2545 at 2702.067 kb on + strand, within Dshi_2545 at 2702.085 kb on - strand, within Dshi_2545 at 2702.120 kb on - strand at 2702.154 kb on - strand at 2702.340 kb on + strand, within Dshi_2546
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 2,699,618 + Dshi_2543 0.14 -0.6 2,699,618 + Dshi_2543 0.14 -0.7 2,699,618 + Dshi_2543 0.14 -1.0 2,699,626 - Dshi_2543 0.14 +0.7 2,699,626 - Dshi_2543 0.14 -0.7 2,699,633 + Dshi_2543 0.15 +0.7 2,699,659 + Dshi_2543 0.17 -0.5 2,699,688 + Dshi_2543 0.20 -0.1 2,699,820 + Dshi_2543 0.33 +0.0 2,699,874 + Dshi_2543 0.38 -0.3 2,699,974 + Dshi_2543 0.47 -0.0 2,700,142 + Dshi_2543 0.63 -1.5 2,700,209 + Dshi_2543 0.69 -0.7 2,700,216 + Dshi_2543 0.70 -0.3 2,700,216 + Dshi_2543 0.70 +0.1 2,700,240 + Dshi_2543 0.72 -0.7 2,700,248 - Dshi_2543 0.73 +0.1 2,700,321 - Dshi_2543 0.80 -0.1 2,700,328 - Dshi_2543 0.81 -0.3 2,700,344 + Dshi_2543 0.82 -0.2 2,700,344 + Dshi_2543 0.82 -0.3 2,700,362 - Dshi_2543 0.84 -0.2 2,700,398 - Dshi_2543 0.87 -1.8 2,700,398 - Dshi_2543 0.87 -0.9 2,700,409 - Dshi_2543 0.88 -0.7 2,700,413 + Dshi_2543 0.89 -1.2 2,700,448 - +0.4 2,700,463 + +0.4 2,700,473 - -0.5 2,700,605 + -0.2 2,700,651 + Dshi_2544 0.15 -0.0 2,700,661 + Dshi_2544 0.16 +0.3 2,700,661 + Dshi_2544 0.16 +0.3 2,700,679 - Dshi_2544 0.18 +0.3 2,700,680 - Dshi_2544 0.18 -0.3 2,700,743 - Dshi_2544 0.26 -1.2 2,700,743 - Dshi_2544 0.26 +0.4 2,700,747 + Dshi_2544 0.26 +0.7 2,700,748 - Dshi_2544 0.27 -1.5 2,700,755 - Dshi_2544 0.27 -2.2 2,700,852 - Dshi_2544 0.39 -0.2 2,700,921 + Dshi_2544 0.48 -0.3 2,700,929 - Dshi_2544 0.49 -1.3 2,700,929 - Dshi_2544 0.49 -0.1 2,700,964 + Dshi_2544 0.53 -0.6 2,700,964 + Dshi_2544 0.53 -0.3 2,700,972 - Dshi_2544 0.54 +0.6 2,701,004 + Dshi_2544 0.58 -1.0 2,701,022 - Dshi_2544 0.60 -0.4 2,701,098 - Dshi_2544 0.70 -0.2 2,701,124 + Dshi_2544 0.73 +0.0 2,701,170 + Dshi_2544 0.79 -0.3 2,701,174 + Dshi_2544 0.79 -0.6 2,701,178 - Dshi_2544 0.80 +0.1 2,701,206 - Dshi_2544 0.83 -1.5 2,701,241 + Dshi_2544 0.87 +1.3 2,701,241 + Dshi_2544 0.87 +1.0 2,701,249 - Dshi_2544 0.88 -1.2 2,701,328 + +1.5 2,701,336 + +0.1 2,701,361 + -0.2 2,701,402 + +0.9 2,701,433 + Dshi_2545 0.11 +0.1 2,701,535 + Dshi_2545 0.23 -1.3 2,701,551 - Dshi_2545 0.25 +1.0 2,701,567 - Dshi_2545 0.26 -0.8 2,701,577 - Dshi_2545 0.28 +1.0 2,701,579 + Dshi_2545 0.28 -0.8 2,701,597 + Dshi_2545 0.30 -0.5 2,701,684 + Dshi_2545 0.40 -0.3 2,701,715 - Dshi_2545 0.44 -0.3 2,701,742 - Dshi_2545 0.47 +0.0 2,701,745 + Dshi_2545 0.47 -0.4 2,701,788 + Dshi_2545 0.52 +0.3 2,701,892 - Dshi_2545 0.64 +0.3 2,701,912 - Dshi_2545 0.66 -1.3 2,701,925 + Dshi_2545 0.68 -0.5 2,702,067 + Dshi_2545 0.84 -0.5 2,702,085 - Dshi_2545 0.86 -0.6 2,702,120 - -0.1 2,702,154 - +0.4 2,702,340 + Dshi_2546 0.14 -0.1
Or see this region's nucleotide sequence