Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2476 and Dshi_2477 are separated by 383 nucleotides Dshi_2477 and Dshi_2478 are separated by 63 nucleotides Dshi_2478 and Dshi_2479 are separated by 6 nucleotides
Dshi_2476: Dshi_2476 - septum formation inhibitor-activating ATPase-like protein (RefSeq), at 2,628,776 to 2,629,864
_2476
Dshi_2477: Dshi_2477 - transcriptional regulator, AsnC family (RefSeq), at 2,630,248 to 2,630,712
_2477
Dshi_2478: Dshi_2478 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 2,630,776 to 2,631,372
_2478
Dshi_2479: Dshi_2479 - transcriptional regulator, LysR family (RefSeq), at 2,631,379 to 2,632,347
_2479
Position (kb)
2630
2631
2632 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2629.867 kb on - strand at 2629.870 kb on + strand at 2629.870 kb on + strand at 2629.878 kb on - strand at 2629.878 kb on - strand at 2629.884 kb on + strand at 2629.886 kb on - strand at 2629.902 kb on + strand at 2629.905 kb on - strand at 2629.907 kb on + strand at 2629.910 kb on - strand at 2629.910 kb on - strand at 2629.910 kb on - strand at 2629.912 kb on + strand at 2629.912 kb on + strand at 2629.912 kb on + strand at 2629.912 kb on + strand at 2629.912 kb on + strand at 2629.912 kb on + strand at 2629.912 kb on + strand at 2629.920 kb on - strand at 2629.920 kb on - strand at 2629.920 kb on - strand at 2629.920 kb on - strand at 2629.920 kb on - strand at 2629.923 kb on - strand at 2630.039 kb on - strand at 2630.048 kb on + strand at 2630.055 kb on + strand at 2630.117 kb on - strand at 2630.156 kb on - strand at 2630.200 kb on + strand at 2630.249 kb on + strand at 2630.249 kb on - strand at 2630.254 kb on - strand at 2630.265 kb on + strand at 2630.265 kb on + strand at 2630.265 kb on + strand at 2630.265 kb on + strand at 2630.388 kb on - strand, within Dshi_2477 at 2630.421 kb on + strand, within Dshi_2477 at 2630.421 kb on + strand, within Dshi_2477 at 2630.429 kb on - strand, within Dshi_2477 at 2630.446 kb on + strand, within Dshi_2477 at 2630.450 kb on + strand, within Dshi_2477 at 2630.450 kb on + strand, within Dshi_2477 at 2630.475 kb on + strand, within Dshi_2477 at 2630.510 kb on - strand, within Dshi_2477 at 2630.515 kb on + strand, within Dshi_2477 at 2630.523 kb on - strand, within Dshi_2477 at 2630.525 kb on + strand, within Dshi_2477 at 2630.535 kb on + strand, within Dshi_2477 at 2630.538 kb on - strand, within Dshi_2477 at 2630.557 kb on - strand, within Dshi_2477 at 2630.575 kb on + strand, within Dshi_2477 at 2630.584 kb on - strand, within Dshi_2477 at 2630.659 kb on - strand, within Dshi_2477 at 2630.846 kb on + strand, within Dshi_2478 at 2630.854 kb on - strand, within Dshi_2478 at 2630.862 kb on - strand, within Dshi_2478 at 2630.862 kb on - strand, within Dshi_2478 at 2630.909 kb on + strand, within Dshi_2478 at 2630.923 kb on - strand, within Dshi_2478 at 2630.997 kb on + strand, within Dshi_2478 at 2631.114 kb on + strand, within Dshi_2478 at 2631.258 kb on - strand, within Dshi_2478 at 2631.319 kb on - strand at 2631.352 kb on - strand at 2631.423 kb on + strand at 2631.492 kb on - strand, within Dshi_2479 at 2631.575 kb on - strand, within Dshi_2479 at 2631.643 kb on - strand, within Dshi_2479 at 2631.824 kb on - strand, within Dshi_2479 at 2632.099 kb on - strand, within Dshi_2479 at 2632.102 kb on + strand, within Dshi_2479
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 2,629,867 - -3.0 2,629,870 + +0.3 2,629,870 + -2.4 2,629,878 - -0.4 2,629,878 - -0.4 2,629,884 + -0.7 2,629,886 - -2.0 2,629,902 + +0.9 2,629,905 - +0.1 2,629,907 + -0.3 2,629,910 - -0.1 2,629,910 - -0.9 2,629,910 - -0.0 2,629,912 + +0.3 2,629,912 + +0.0 2,629,912 + -0.9 2,629,912 + -1.0 2,629,912 + +1.0 2,629,912 + -0.2 2,629,912 + -0.9 2,629,920 - +0.1 2,629,920 - -1.9 2,629,920 - +1.0 2,629,920 - -1.2 2,629,920 - -0.2 2,629,923 - +0.5 2,630,039 - -1.5 2,630,048 + -0.7 2,630,055 + +0.4 2,630,117 - +0.4 2,630,156 - +0.8 2,630,200 + -0.4 2,630,249 + +1.7 2,630,249 - -0.1 2,630,254 - -1.7 2,630,265 + -0.7 2,630,265 + -0.7 2,630,265 + -0.2 2,630,265 + +0.8 2,630,388 - Dshi_2477 0.30 +1.3 2,630,421 + Dshi_2477 0.37 +0.2 2,630,421 + Dshi_2477 0.37 -0.1 2,630,429 - Dshi_2477 0.39 +0.8 2,630,446 + Dshi_2477 0.43 -0.4 2,630,450 + Dshi_2477 0.43 +0.3 2,630,450 + Dshi_2477 0.43 -2.0 2,630,475 + Dshi_2477 0.49 +0.0 2,630,510 - Dshi_2477 0.56 -1.5 2,630,515 + Dshi_2477 0.57 +1.0 2,630,523 - Dshi_2477 0.59 +0.1 2,630,525 + Dshi_2477 0.60 -0.2 2,630,535 + Dshi_2477 0.62 -0.4 2,630,538 - Dshi_2477 0.62 +0.4 2,630,557 - Dshi_2477 0.66 +0.8 2,630,575 + Dshi_2477 0.70 -0.4 2,630,584 - Dshi_2477 0.72 +0.4 2,630,659 - Dshi_2477 0.88 +0.1 2,630,846 + Dshi_2478 0.12 -2.5 2,630,854 - Dshi_2478 0.13 -1.2 2,630,862 - Dshi_2478 0.14 -0.4 2,630,862 - Dshi_2478 0.14 -0.1 2,630,909 + Dshi_2478 0.22 -0.5 2,630,923 - Dshi_2478 0.25 -1.1 2,630,997 + Dshi_2478 0.37 +0.0 2,631,114 + Dshi_2478 0.57 +0.7 2,631,258 - Dshi_2478 0.81 -1.5 2,631,319 - +0.8 2,631,352 - -0.5 2,631,423 + -0.5 2,631,492 - Dshi_2479 0.12 +0.3 2,631,575 - Dshi_2479 0.20 -0.5 2,631,643 - Dshi_2479 0.27 +0.1 2,631,824 - Dshi_2479 0.46 +0.1 2,632,099 - Dshi_2479 0.74 +0.2 2,632,102 + Dshi_2479 0.75 -0.0
Or see this region's nucleotide sequence