Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1814 and Dshi_1815 are separated by 384 nucleotides Dshi_1815 and Dshi_1816 are separated by 87 nucleotides
Dshi_1814: Dshi_1814 - hypothetical protein (RefSeq), at 1,891,703 to 1,892,863
_1814
Dshi_1815: Dshi_1815 - transcriptional regulator, LuxR family (RefSeq), at 1,893,248 to 1,894,045
_1815
Dshi_1816: Dshi_1816 - MscS Mechanosensitive ion channel (RefSeq), at 1,894,133 to 1,895,479
_1816
Position (kb)
1893
1894
1895 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1892.288 kb on - strand, within Dshi_1814 at 1892.307 kb on - strand, within Dshi_1814 at 1892.423 kb on - strand, within Dshi_1814 at 1892.523 kb on - strand, within Dshi_1814 at 1892.534 kb on + strand, within Dshi_1814 at 1892.544 kb on + strand, within Dshi_1814 at 1892.594 kb on + strand, within Dshi_1814 at 1892.770 kb on - strand at 1893.143 kb on - strand at 1893.247 kb on - strand at 1893.270 kb on + strand at 1893.331 kb on - strand, within Dshi_1815 at 1893.333 kb on - strand, within Dshi_1815 at 1893.365 kb on + strand, within Dshi_1815 at 1893.498 kb on - strand, within Dshi_1815 at 1893.549 kb on - strand, within Dshi_1815 at 1893.732 kb on + strand, within Dshi_1815 at 1893.776 kb on + strand, within Dshi_1815 at 1893.961 kb on - strand, within Dshi_1815 at 1893.974 kb on - strand at 1894.055 kb on + strand at 1894.168 kb on + strand at 1894.203 kb on - strand at 1894.248 kb on - strand at 1894.253 kb on - strand at 1894.302 kb on - strand, within Dshi_1816 at 1894.302 kb on - strand, within Dshi_1816 at 1894.335 kb on - strand, within Dshi_1816 at 1894.401 kb on - strand, within Dshi_1816 at 1894.543 kb on - strand, within Dshi_1816 at 1894.585 kb on - strand, within Dshi_1816 at 1894.659 kb on + strand, within Dshi_1816 at 1894.687 kb on + strand, within Dshi_1816 at 1894.921 kb on - strand, within Dshi_1816 at 1894.982 kb on - strand, within Dshi_1816
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 1,892,288 - Dshi_1814 0.50 -0.7 1,892,307 - Dshi_1814 0.52 -1.2 1,892,423 - Dshi_1814 0.62 -0.6 1,892,523 - Dshi_1814 0.71 +0.7 1,892,534 + Dshi_1814 0.72 -0.4 1,892,544 + Dshi_1814 0.72 -1.3 1,892,594 + Dshi_1814 0.77 -0.1 1,892,770 - -0.1 1,893,143 - +0.3 1,893,247 - -1.0 1,893,270 + +0.9 1,893,331 - Dshi_1815 0.10 -0.1 1,893,333 - Dshi_1815 0.11 -0.1 1,893,365 + Dshi_1815 0.15 -2.8 1,893,498 - Dshi_1815 0.31 -2.7 1,893,549 - Dshi_1815 0.38 +0.4 1,893,732 + Dshi_1815 0.61 -1.6 1,893,776 + Dshi_1815 0.66 -0.4 1,893,961 - Dshi_1815 0.89 +0.0 1,893,974 - +0.1 1,894,055 + +0.2 1,894,168 + -0.3 1,894,203 - +0.1 1,894,248 - -0.8 1,894,253 - -1.4 1,894,302 - Dshi_1816 0.13 +0.6 1,894,302 - Dshi_1816 0.13 +1.6 1,894,335 - Dshi_1816 0.15 -0.2 1,894,401 - Dshi_1816 0.20 -0.3 1,894,543 - Dshi_1816 0.30 -0.0 1,894,585 - Dshi_1816 0.34 +0.4 1,894,659 + Dshi_1816 0.39 -0.5 1,894,687 + Dshi_1816 0.41 -0.2 1,894,921 - Dshi_1816 0.59 -0.3 1,894,982 - Dshi_1816 0.63 -0.3
Or see this region's nucleotide sequence