Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1655 and Dshi_1656 overlap by 4 nucleotides Dshi_1656 and Dshi_1657 overlap by 4 nucleotides Dshi_1657 and Dshi_1658 overlap by 4 nucleotides
Dshi_1655: Dshi_1655 - glucokinase (EC 2.7.1.2) (from data) , at 1,721,208 to 1,722,179
_1655
Dshi_1656: Dshi_1656 - ABC-3 protein (RefSeq), at 1,722,176 to 1,723,027
_1656
Dshi_1657: Dshi_1657 - ABC-3 protein (RefSeq), at 1,723,024 to 1,723,923
_1657
Dshi_1658: Dshi_1658 - ABC transporter related (RefSeq), at 1,723,920 to 1,724,816
_1658
Position (kb)
1722
1723
1724 Strain fitness (log2 ratio)
-1
0
1
2 at 1721.284 kb on + strand at 1721.347 kb on + strand, within Dshi_1655 at 1721.411 kb on + strand, within Dshi_1655 at 1721.647 kb on + strand, within Dshi_1655 at 1721.925 kb on - strand, within Dshi_1655 at 1721.939 kb on + strand, within Dshi_1655 at 1722.208 kb on - strand at 1722.269 kb on - strand, within Dshi_1656 at 1722.364 kb on + strand, within Dshi_1656 at 1722.367 kb on - strand, within Dshi_1656 at 1722.447 kb on + strand, within Dshi_1656 at 1722.447 kb on + strand, within Dshi_1656 at 1722.447 kb on + strand, within Dshi_1656 at 1722.455 kb on - strand, within Dshi_1656 at 1722.455 kb on - strand, within Dshi_1656 at 1722.455 kb on - strand, within Dshi_1656 at 1722.455 kb on - strand, within Dshi_1656 at 1722.505 kb on + strand, within Dshi_1656 at 1722.740 kb on + strand, within Dshi_1656 at 1722.849 kb on + strand, within Dshi_1656 at 1722.935 kb on - strand, within Dshi_1656 at 1722.942 kb on + strand at 1723.043 kb on - strand at 1723.043 kb on - strand at 1723.066 kb on - strand at 1723.078 kb on - strand at 1723.091 kb on + strand at 1723.114 kb on + strand at 1723.236 kb on + strand, within Dshi_1657 at 1723.288 kb on - strand, within Dshi_1657 at 1723.335 kb on + strand, within Dshi_1657 at 1723.432 kb on + strand, within Dshi_1657 at 1723.515 kb on + strand, within Dshi_1657 at 1723.653 kb on + strand, within Dshi_1657 at 1723.683 kb on + strand, within Dshi_1657 at 1723.709 kb on + strand, within Dshi_1657 at 1723.783 kb on - strand, within Dshi_1657 at 1723.815 kb on + strand, within Dshi_1657 at 1723.845 kb on - strand at 1723.847 kb on + strand at 1723.855 kb on - strand at 1723.942 kb on + strand at 1723.952 kb on + strand at 1723.967 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 1,721,284 + +0.5 1,721,347 + Dshi_1655 0.14 +0.0 1,721,411 + Dshi_1655 0.21 -0.3 1,721,647 + Dshi_1655 0.45 -0.6 1,721,925 - Dshi_1655 0.74 +0.0 1,721,939 + Dshi_1655 0.75 -1.1 1,722,208 - +0.2 1,722,269 - Dshi_1656 0.11 +1.0 1,722,364 + Dshi_1656 0.22 +0.8 1,722,367 - Dshi_1656 0.22 -0.8 1,722,447 + Dshi_1656 0.32 -0.5 1,722,447 + Dshi_1656 0.32 +0.7 1,722,447 + Dshi_1656 0.32 +0.9 1,722,455 - Dshi_1656 0.33 +1.3 1,722,455 - Dshi_1656 0.33 +2.3 1,722,455 - Dshi_1656 0.33 +0.9 1,722,455 - Dshi_1656 0.33 +0.5 1,722,505 + Dshi_1656 0.39 +0.5 1,722,740 + Dshi_1656 0.66 +0.0 1,722,849 + Dshi_1656 0.79 +1.2 1,722,935 - Dshi_1656 0.89 +0.5 1,722,942 + +0.5 1,723,043 - +0.1 1,723,043 - +0.2 1,723,066 - +0.3 1,723,078 - +0.6 1,723,091 + -0.0 1,723,114 + +1.8 1,723,236 + Dshi_1657 0.24 +0.3 1,723,288 - Dshi_1657 0.29 +0.7 1,723,335 + Dshi_1657 0.35 +1.1 1,723,432 + Dshi_1657 0.45 +1.6 1,723,515 + Dshi_1657 0.55 +0.2 1,723,653 + Dshi_1657 0.70 +0.7 1,723,683 + Dshi_1657 0.73 +1.9 1,723,709 + Dshi_1657 0.76 +0.6 1,723,783 - Dshi_1657 0.84 +0.9 1,723,815 + Dshi_1657 0.88 +0.6 1,723,845 - +0.5 1,723,847 + +0.2 1,723,855 - +0.5 1,723,942 + +1.0 1,723,952 + +1.4 1,723,967 + +0.7
Or see this region's nucleotide sequence