Experiment: m.b. Bacitracin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0833 and Dshi_0834 are separated by 93 nucleotides Dshi_0834 and Dshi_0835 are separated by 56 nucleotides
Dshi_0833: Dshi_0833 - AMP-dependent synthetase and ligase (RefSeq), at 841,358 to 842,983
_0833
Dshi_0834: Dshi_0834 - protein of unknown function DUF6 transmembrane (RefSeq), at 843,077 to 843,994
_0834
Dshi_0835: Dshi_0835 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq), at 844,051 to 846,264
_0835
Position (kb) 843
844 Strain fitness (log2 ratio) -2
-1
0
1 at 842.170 kb on - strand, within Dshi_0833 at 842.187 kb on + strand, within Dshi_0833 at 842.382 kb on + strand, within Dshi_0833 at 842.390 kb on - strand, within Dshi_0833 at 842.390 kb on - strand, within Dshi_0833 at 842.390 kb on - strand, within Dshi_0833 at 842.409 kb on + strand, within Dshi_0833 at 842.883 kb on + strand at 842.888 kb on + strand at 842.888 kb on + strand at 842.992 kb on - strand at 843.051 kb on + strand at 843.121 kb on - strand at 843.191 kb on + strand, within Dshi_0834 at 843.240 kb on - strand, within Dshi_0834 at 843.591 kb on + strand, within Dshi_0834 at 843.668 kb on + strand, within Dshi_0834 at 843.687 kb on - strand, within Dshi_0834 at 843.827 kb on + strand, within Dshi_0834 at 844.203 kb on + strand at 844.301 kb on - strand, within Dshi_0835 at 844.307 kb on - strand, within Dshi_0835 at 844.316 kb on + strand, within Dshi_0835 at 844.367 kb on + strand, within Dshi_0835 at 844.406 kb on + strand, within Dshi_0835 at 844.416 kb on + strand, within Dshi_0835 at 844.547 kb on + strand, within Dshi_0835 at 844.817 kb on + strand, within Dshi_0835 at 844.879 kb on - strand, within Dshi_0835 at 844.889 kb on - strand, within Dshi_0835 at 844.898 kb on + strand, within Dshi_0835
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 0.1 mg/ml remove 842,170 - Dshi_0833 0.50 -0.5 842,187 + Dshi_0833 0.51 -0.0 842,382 + Dshi_0833 0.63 +0.9 842,390 - Dshi_0833 0.63 -0.4 842,390 - Dshi_0833 0.63 -1.4 842,390 - Dshi_0833 0.63 +0.0 842,409 + Dshi_0833 0.65 -0.1 842,883 + -0.1 842,888 + +0.7 842,888 + -0.1 842,992 - +0.3 843,051 + +0.2 843,121 - +0.6 843,191 + Dshi_0834 0.12 -0.3 843,240 - Dshi_0834 0.18 +0.2 843,591 + Dshi_0834 0.56 -0.2 843,668 + Dshi_0834 0.64 +0.4 843,687 - Dshi_0834 0.66 +0.4 843,827 + Dshi_0834 0.82 +0.9 844,203 + -2.1 844,301 - Dshi_0835 0.11 +0.1 844,307 - Dshi_0835 0.12 -0.4 844,316 + Dshi_0835 0.12 -0.9 844,367 + Dshi_0835 0.14 -1.1 844,406 + Dshi_0835 0.16 -0.8 844,416 + Dshi_0835 0.16 -0.6 844,547 + Dshi_0835 0.22 -0.6 844,817 + Dshi_0835 0.35 +0.7 844,879 - Dshi_0835 0.37 -0.8 844,889 - Dshi_0835 0.38 -0.8 844,898 + Dshi_0835 0.38 +0.3
Or see this region's nucleotide sequence