Experiment: MoYLS4 with FCCP 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0948 and DVU0949 are separated by 47 nucleotides DVU0949 and moeA-2 are separated by 79 nucleotides moeA-2 and DVU0952 are separated by 1 nucleotides
DVU0948: DVU0948 - conserved hypothetical protein (TIGR), at 1,042,559 to 1,042,987
DVU0948
DVU0949: DVU0949 - conserved domain protein (TIGR), at 1,043,035 to 1,043,796
DVU0949
DVU0951: moeA-2 - molybdopterin biosynthesis MoeA protein, putative (TIGR), at 1,043,876 to 1,045,294
moeA-2
DVU0952: DVU0952 - conserved hypothetical protein TIGR00282 (TIGR), at 1,045,296 to 1,046,168
DVU0952
Position (kb)
1043
1044
1045
1046 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1042.878 kb on - strand, within DVU0948 at 1042.952 kb on - strand at 1043.032 kb on + strand at 1043.047 kb on + strand at 1043.047 kb on + strand at 1043.117 kb on - strand, within DVU0949 at 1043.185 kb on - strand, within DVU0949 at 1043.246 kb on + strand, within DVU0949 at 1043.278 kb on - strand, within DVU0949 at 1043.367 kb on - strand, within DVU0949 at 1043.452 kb on - strand, within DVU0949 at 1043.469 kb on - strand, within DVU0949 at 1043.482 kb on + strand, within DVU0949 at 1043.501 kb on + strand, within DVU0949 at 1043.506 kb on + strand, within DVU0949 at 1043.532 kb on + strand, within DVU0949 at 1043.567 kb on - strand, within DVU0949 at 1043.587 kb on - strand, within DVU0949 at 1043.655 kb on - strand, within DVU0949 at 1043.666 kb on - strand, within DVU0949 at 1043.753 kb on + strand at 1043.901 kb on - strand at 1043.905 kb on + strand at 1043.915 kb on + strand at 1043.915 kb on + strand at 1043.942 kb on + strand at 1043.989 kb on + strand at 1044.210 kb on + strand, within moeA-2 at 1044.234 kb on + strand, within moeA-2 at 1044.254 kb on + strand, within moeA-2 at 1044.335 kb on - strand, within moeA-2 at 1044.477 kb on - strand, within moeA-2 at 1044.488 kb on + strand, within moeA-2 at 1044.683 kb on - strand, within moeA-2 at 1044.737 kb on + strand, within moeA-2 at 1044.802 kb on - strand, within moeA-2 at 1044.943 kb on + strand, within moeA-2 at 1044.944 kb on + strand, within moeA-2 at 1044.972 kb on - strand, within moeA-2 at 1045.056 kb on + strand, within moeA-2 at 1045.076 kb on - strand, within moeA-2 at 1045.142 kb on + strand, within moeA-2 at 1045.189 kb on + strand at 1045.287 kb on - strand at 1045.288 kb on + strand at 1045.296 kb on - strand at 1045.339 kb on + strand at 1045.347 kb on - strand at 1045.347 kb on - strand at 1045.349 kb on + strand at 1045.479 kb on + strand, within DVU0952 at 1045.479 kb on + strand, within DVU0952 at 1045.600 kb on - strand, within DVU0952 at 1045.629 kb on - strand, within DVU0952 at 1045.718 kb on + strand, within DVU0952 at 1045.726 kb on - strand, within DVU0952 at 1045.752 kb on + strand, within DVU0952 at 1045.781 kb on - strand, within DVU0952 at 1045.781 kb on - strand, within DVU0952 at 1045.807 kb on - strand, within DVU0952 at 1045.856 kb on - strand, within DVU0952 at 1045.925 kb on + strand, within DVU0952 at 1045.925 kb on + strand, within DVU0952 at 1045.935 kb on + strand, within DVU0952 at 1045.970 kb on + strand, within DVU0952 at 1045.978 kb on - strand, within DVU0952 at 1045.978 kb on - strand, within DVU0952 at 1045.978 kb on - strand, within DVU0952 at 1045.978 kb on - strand, within DVU0952 at 1046.072 kb on + strand, within DVU0952 at 1046.072 kb on + strand, within DVU0952 at 1046.074 kb on + strand, within DVU0952 at 1046.074 kb on + strand, within DVU0952 at 1046.149 kb on + strand at 1046.169 kb on - strand at 1046.169 kb on - strand at 1046.188 kb on + strand at 1046.217 kb on + strand at 1046.220 kb on - strand at 1046.222 kb on + strand at 1046.222 kb on + strand at 1046.222 kb on + strand at 1046.222 kb on + strand at 1046.230 kb on - strand at 1046.230 kb on - strand at 1046.230 kb on - strand at 1046.230 kb on - strand at 1046.273 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with FCCP 10uM remove 1,042,878 - DVU0948 0.74 +1.7 1,042,952 - -0.5 1,043,032 + -0.7 1,043,047 + +0.1 1,043,047 + -1.4 1,043,117 - DVU0949 0.11 -0.8 1,043,185 - DVU0949 0.20 -1.0 1,043,246 + DVU0949 0.28 -0.6 1,043,278 - DVU0949 0.32 -0.3 1,043,367 - DVU0949 0.44 +0.7 1,043,452 - DVU0949 0.55 -1.8 1,043,469 - DVU0949 0.57 -2.6 1,043,482 + DVU0949 0.59 -0.8 1,043,501 + DVU0949 0.61 +1.0 1,043,506 + DVU0949 0.62 +1.0 1,043,532 + DVU0949 0.65 +1.0 1,043,567 - DVU0949 0.70 +0.6 1,043,587 - DVU0949 0.72 -0.7 1,043,655 - DVU0949 0.81 -0.3 1,043,666 - DVU0949 0.83 +0.0 1,043,753 + +2.0 1,043,901 - -0.2 1,043,905 + -0.6 1,043,915 + -0.0 1,043,915 + -0.3 1,043,942 + +1.0 1,043,989 + -4.7 1,044,210 + moeA-2 DVU0951 0.24 -2.3 1,044,234 + moeA-2 DVU0951 0.25 -0.6 1,044,254 + moeA-2 DVU0951 0.27 -2.4 1,044,335 - moeA-2 DVU0951 0.32 -0.6 1,044,477 - moeA-2 DVU0951 0.42 -1.6 1,044,488 + moeA-2 DVU0951 0.43 -2.1 1,044,683 - moeA-2 DVU0951 0.57 -1.0 1,044,737 + moeA-2 DVU0951 0.61 -1.3 1,044,802 - moeA-2 DVU0951 0.65 +0.0 1,044,943 + moeA-2 DVU0951 0.75 -3.2 1,044,944 + moeA-2 DVU0951 0.75 -1.0 1,044,972 - moeA-2 DVU0951 0.77 -2.8 1,045,056 + moeA-2 DVU0951 0.83 -2.0 1,045,076 - moeA-2 DVU0951 0.85 -0.6 1,045,142 + moeA-2 DVU0951 0.89 -1.6 1,045,189 + -3.1 1,045,287 - +0.7 1,045,288 + +1.0 1,045,296 - +0.6 1,045,339 + +0.9 1,045,347 - +1.0 1,045,347 - -0.4 1,045,349 + +0.9 1,045,479 + DVU0952 0.21 +0.4 1,045,479 + DVU0952 0.21 -1.3 1,045,600 - DVU0952 0.35 -0.5 1,045,629 - DVU0952 0.38 -0.5 1,045,718 + DVU0952 0.48 +0.0 1,045,726 - DVU0952 0.49 -0.3 1,045,752 + DVU0952 0.52 -1.6 1,045,781 - DVU0952 0.56 -1.3 1,045,781 - DVU0952 0.56 +0.2 1,045,807 - DVU0952 0.59 +1.0 1,045,856 - DVU0952 0.64 +1.0 1,045,925 + DVU0952 0.72 -0.3 1,045,925 + DVU0952 0.72 -0.5 1,045,935 + DVU0952 0.73 -1.0 1,045,970 + DVU0952 0.77 -0.1 1,045,978 - DVU0952 0.78 -0.1 1,045,978 - DVU0952 0.78 -0.6 1,045,978 - DVU0952 0.78 -0.6 1,045,978 - DVU0952 0.78 +0.6 1,046,072 + DVU0952 0.89 +0.4 1,046,072 + DVU0952 0.89 -1.6 1,046,074 + DVU0952 0.89 -0.4 1,046,074 + DVU0952 0.89 +2.0 1,046,149 + -0.1 1,046,169 - +0.0 1,046,169 - -0.1 1,046,188 + +0.1 1,046,217 + +0.0 1,046,220 - -0.1 1,046,222 + -0.3 1,046,222 + +0.4 1,046,222 + -4.2 1,046,222 + -0.4 1,046,230 - +0.4 1,046,230 - -2.4 1,046,230 - -0.1 1,046,230 - -0.2 1,046,273 - -0.6
Or see this region's nucleotide sequence