Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03808 and H281DRAFT_03809 are separated by 151 nucleotides H281DRAFT_03809 and H281DRAFT_03810 are separated by 99 nucleotides
H281DRAFT_03808: H281DRAFT_03808 - Pimeloyl-ACP methyl ester carboxylesterase, at 330,424 to 331,254
_03808
H281DRAFT_03809: H281DRAFT_03809 - transcriptional regulator, LysR family, at 331,406 to 332,299
_03809
H281DRAFT_03810: H281DRAFT_03810 - citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family, at 332,399 to 333,703
_03810
Position (kb) 331
332
333 Strain fitness (log2 ratio) -1
0
1 at 330.408 kb on + strand at 330.409 kb on - strand at 330.409 kb on - strand at 330.563 kb on + strand, within H281DRAFT_03808 at 330.564 kb on - strand, within H281DRAFT_03808 at 330.653 kb on + strand, within H281DRAFT_03808 at 330.653 kb on + strand, within H281DRAFT_03808 at 330.654 kb on - strand, within H281DRAFT_03808 at 330.654 kb on - strand, within H281DRAFT_03808 at 330.965 kb on + strand, within H281DRAFT_03808 at 330.966 kb on - strand, within H281DRAFT_03808 at 330.972 kb on - strand, within H281DRAFT_03808 at 331.062 kb on - strand, within H281DRAFT_03808 at 331.134 kb on - strand at 331.282 kb on + strand at 331.283 kb on - strand at 331.626 kb on + strand, within H281DRAFT_03809 at 331.627 kb on - strand, within H281DRAFT_03809 at 331.627 kb on - strand, within H281DRAFT_03809 at 331.821 kb on - strand, within H281DRAFT_03809 at 331.821 kb on - strand, within H281DRAFT_03809 at 331.821 kb on - strand, within H281DRAFT_03809 at 332.309 kb on + strand at 333.207 kb on - strand, within H281DRAFT_03810
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 330,408 + +0.1 330,409 - -1.4 330,409 - +0.7 330,563 + H281DRAFT_03808 0.17 +0.5 330,564 - H281DRAFT_03808 0.17 +1.0 330,653 + H281DRAFT_03808 0.28 +0.3 330,653 + H281DRAFT_03808 0.28 +0.3 330,654 - H281DRAFT_03808 0.28 +0.1 330,654 - H281DRAFT_03808 0.28 +0.7 330,965 + H281DRAFT_03808 0.65 -0.1 330,966 - H281DRAFT_03808 0.65 +0.2 330,972 - H281DRAFT_03808 0.66 +0.3 331,062 - H281DRAFT_03808 0.77 +0.4 331,134 - +0.8 331,282 + +0.3 331,283 - -0.7 331,626 + H281DRAFT_03809 0.25 +0.0 331,627 - H281DRAFT_03809 0.25 -1.0 331,627 - H281DRAFT_03809 0.25 -0.5 331,821 - H281DRAFT_03809 0.46 +0.2 331,821 - H281DRAFT_03809 0.46 +0.5 331,821 - H281DRAFT_03809 0.46 -0.9 332,309 + -0.1 333,207 - H281DRAFT_03810 0.62 -0.7
Or see this region's nucleotide sequence