Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c24240 and PGA1_c24250 overlap by 19 nucleotides PGA1_c24250 and PGA1_c24260 are separated by 312 nucleotides
PGA1_c24240: PGA1_c24240 - putative S-adenosylmethionine uptake transporter, at 2,529,725 to 2,530,666
_c24240
PGA1_c24250: PGA1_c24250 - inner membrane transport permease, at 2,530,648 to 2,531,484
_c24250
PGA1_c24260: PGA1_c24260 - cell cycle regulator GcrA, at 2,531,797 to 2,532,405
_c24260
Position (kb)
2530
2531
2532 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2529.725 kb on + strand at 2529.725 kb on + strand at 2529.725 kb on + strand at 2529.725 kb on + strand at 2529.725 kb on + strand at 2529.725 kb on + strand at 2529.733 kb on - strand at 2529.733 kb on - strand at 2529.733 kb on - strand at 2529.733 kb on - strand at 2529.733 kb on - strand at 2529.733 kb on - strand at 2529.841 kb on + strand, within PGA1_c24240 at 2529.874 kb on - strand, within PGA1_c24240 at 2529.923 kb on - strand, within PGA1_c24240 at 2529.926 kb on - strand, within PGA1_c24240 at 2529.948 kb on - strand, within PGA1_c24240 at 2529.973 kb on - strand, within PGA1_c24240 at 2529.990 kb on + strand, within PGA1_c24240 at 2530.001 kb on + strand, within PGA1_c24240 at 2530.041 kb on + strand, within PGA1_c24240 at 2530.044 kb on - strand, within PGA1_c24240 at 2530.049 kb on - strand, within PGA1_c24240 at 2530.224 kb on - strand, within PGA1_c24240 at 2530.281 kb on - strand, within PGA1_c24240 at 2530.292 kb on + strand, within PGA1_c24240 at 2530.317 kb on - strand, within PGA1_c24240 at 2530.322 kb on - strand, within PGA1_c24240 at 2530.329 kb on + strand, within PGA1_c24240 at 2530.466 kb on + strand, within PGA1_c24240 at 2530.486 kb on + strand, within PGA1_c24240 at 2530.564 kb on - strand, within PGA1_c24240 at 2530.590 kb on + strand at 2530.606 kb on - strand at 2530.646 kb on + strand at 2530.685 kb on - strand at 2530.685 kb on - strand at 2530.716 kb on + strand at 2530.748 kb on - strand, within PGA1_c24250 at 2530.781 kb on + strand, within PGA1_c24250 at 2530.822 kb on + strand, within PGA1_c24250 at 2531.020 kb on + strand, within PGA1_c24250 at 2531.027 kb on + strand, within PGA1_c24250 at 2531.040 kb on - strand, within PGA1_c24250 at 2531.149 kb on + strand, within PGA1_c24250 at 2531.157 kb on - strand, within PGA1_c24250 at 2531.157 kb on - strand, within PGA1_c24250 at 2531.157 kb on - strand, within PGA1_c24250 at 2531.162 kb on - strand, within PGA1_c24250 at 2531.182 kb on + strand, within PGA1_c24250 at 2531.272 kb on + strand, within PGA1_c24250 at 2531.323 kb on - strand, within PGA1_c24250 at 2531.352 kb on - strand, within PGA1_c24250 at 2531.353 kb on - strand, within PGA1_c24250 at 2531.379 kb on + strand, within PGA1_c24250 at 2531.387 kb on - strand, within PGA1_c24250 at 2531.387 kb on - strand, within PGA1_c24250 at 2531.387 kb on - strand, within PGA1_c24250 at 2531.397 kb on - strand, within PGA1_c24250 at 2531.402 kb on - strand at 2531.433 kb on + strand at 2531.449 kb on + strand at 2531.463 kb on + strand at 2531.463 kb on + strand at 2531.463 kb on + strand at 2531.463 kb on + strand at 2531.471 kb on - strand at 2531.476 kb on - strand at 2531.478 kb on + strand at 2531.537 kb on - strand at 2531.554 kb on + strand at 2531.602 kb on - strand at 2531.635 kb on - strand at 2531.646 kb on + strand at 2531.673 kb on + strand at 2532.406 kb on + strand at 2532.439 kb on + strand at 2532.440 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,529,725 + -0.3 2,529,725 + +0.9 2,529,725 + -2.4 2,529,725 + +1.0 2,529,725 + -0.3 2,529,725 + +0.5 2,529,733 - +0.2 2,529,733 - +0.2 2,529,733 - -0.3 2,529,733 - -0.3 2,529,733 - -0.6 2,529,733 - +1.6 2,529,841 + PGA1_c24240 0.12 -1.0 2,529,874 - PGA1_c24240 0.16 +0.4 2,529,923 - PGA1_c24240 0.21 -0.6 2,529,926 - PGA1_c24240 0.21 +0.3 2,529,948 - PGA1_c24240 0.24 +1.7 2,529,973 - PGA1_c24240 0.26 -1.3 2,529,990 + PGA1_c24240 0.28 -0.4 2,530,001 + PGA1_c24240 0.29 -0.3 2,530,041 + PGA1_c24240 0.34 -1.9 2,530,044 - PGA1_c24240 0.34 +0.9 2,530,049 - PGA1_c24240 0.34 +1.1 2,530,224 - PGA1_c24240 0.53 +1.9 2,530,281 - PGA1_c24240 0.59 -1.7 2,530,292 + PGA1_c24240 0.60 -0.2 2,530,317 - PGA1_c24240 0.63 -0.4 2,530,322 - PGA1_c24240 0.63 -2.3 2,530,329 + PGA1_c24240 0.64 +0.7 2,530,466 + PGA1_c24240 0.79 -1.6 2,530,486 + PGA1_c24240 0.81 -0.9 2,530,564 - PGA1_c24240 0.89 +0.2 2,530,590 + -1.5 2,530,606 - -0.8 2,530,646 + -2.7 2,530,685 - +0.5 2,530,685 - -2.1 2,530,716 + +0.1 2,530,748 - PGA1_c24250 0.12 -0.7 2,530,781 + PGA1_c24250 0.16 +0.3 2,530,822 + PGA1_c24250 0.21 +2.8 2,531,020 + PGA1_c24250 0.44 +0.9 2,531,027 + PGA1_c24250 0.45 +0.5 2,531,040 - PGA1_c24250 0.47 +1.0 2,531,149 + PGA1_c24250 0.60 +2.2 2,531,157 - PGA1_c24250 0.61 +0.9 2,531,157 - PGA1_c24250 0.61 -1.1 2,531,157 - PGA1_c24250 0.61 +0.4 2,531,162 - PGA1_c24250 0.61 -0.5 2,531,182 + PGA1_c24250 0.64 -0.5 2,531,272 + PGA1_c24250 0.75 +1.6 2,531,323 - PGA1_c24250 0.81 -1.1 2,531,352 - PGA1_c24250 0.84 +0.9 2,531,353 - PGA1_c24250 0.84 -1.3 2,531,379 + PGA1_c24250 0.87 +0.4 2,531,387 - PGA1_c24250 0.88 +0.6 2,531,387 - PGA1_c24250 0.88 +0.7 2,531,387 - PGA1_c24250 0.88 -1.2 2,531,397 - PGA1_c24250 0.89 -0.4 2,531,402 - +1.3 2,531,433 + -0.1 2,531,449 + -1.3 2,531,463 + +0.8 2,531,463 + -1.5 2,531,463 + +0.6 2,531,463 + -0.7 2,531,471 - +0.0 2,531,476 - -2.1 2,531,478 + -1.4 2,531,537 - +1.0 2,531,554 + +0.9 2,531,602 - -0.3 2,531,635 - +1.3 2,531,646 + +0.1 2,531,673 + +0.4 2,532,406 + +0.4 2,532,439 + +0.3 2,532,440 - -0.4
Or see this region's nucleotide sequence