Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c15320 and PGA1_c15330 overlap by 8 nucleotides PGA1_c15330 and PGA1_c15340 overlap by 1 nucleotides PGA1_c15340 and PGA1_c15350 are separated by 188 nucleotides
PGA1_c15320: PGA1_c15320 - Predicted hydrolases of HD superfamily, at 1,596,764 to 1,597,936
_c15320
PGA1_c15330: PGA1_c15330 - hypothetical protein, at 1,597,929 to 1,598,177
_c15330
PGA1_c15340: PGA1_c15340 - Predicted hydrolase of the alpha/beta superfamily, at 1,598,177 to 1,598,830
_c15340
PGA1_c15350: PGA1_c15350 - putative transcriptional regulator, at 1,599,019 to 1,599,477
_c15350
Position (kb)
1597
1598
1599 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1596.975 kb on - strand, within PGA1_c15320 at 1597.095 kb on + strand, within PGA1_c15320 at 1597.156 kb on + strand, within PGA1_c15320 at 1597.164 kb on - strand, within PGA1_c15320 at 1597.197 kb on + strand, within PGA1_c15320 at 1597.197 kb on + strand, within PGA1_c15320 at 1597.200 kb on - strand, within PGA1_c15320 at 1597.205 kb on - strand, within PGA1_c15320 at 1597.321 kb on + strand, within PGA1_c15320 at 1597.368 kb on + strand, within PGA1_c15320 at 1597.391 kb on + strand, within PGA1_c15320 at 1597.398 kb on + strand, within PGA1_c15320 at 1597.399 kb on - strand, within PGA1_c15320 at 1597.437 kb on + strand, within PGA1_c15320 at 1597.437 kb on + strand, within PGA1_c15320 at 1597.437 kb on + strand, within PGA1_c15320 at 1597.445 kb on - strand, within PGA1_c15320 at 1597.535 kb on - strand, within PGA1_c15320 at 1597.738 kb on - strand, within PGA1_c15320 at 1597.743 kb on - strand, within PGA1_c15320 at 1597.784 kb on - strand, within PGA1_c15320 at 1597.784 kb on - strand, within PGA1_c15320 at 1597.957 kb on + strand, within PGA1_c15330 at 1597.965 kb on - strand, within PGA1_c15330 at 1598.007 kb on + strand, within PGA1_c15330 at 1598.056 kb on - strand, within PGA1_c15330 at 1598.118 kb on + strand, within PGA1_c15330 at 1599.000 kb on + strand at 1599.000 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,596,975 - PGA1_c15320 0.18 +0.6 1,597,095 + PGA1_c15320 0.28 +0.3 1,597,156 + PGA1_c15320 0.33 +2.1 1,597,164 - PGA1_c15320 0.34 -0.1 1,597,197 + PGA1_c15320 0.37 -0.0 1,597,197 + PGA1_c15320 0.37 +0.6 1,597,200 - PGA1_c15320 0.37 +0.7 1,597,205 - PGA1_c15320 0.38 +0.7 1,597,321 + PGA1_c15320 0.47 -2.4 1,597,368 + PGA1_c15320 0.51 +0.8 1,597,391 + PGA1_c15320 0.53 -1.1 1,597,398 + PGA1_c15320 0.54 +0.6 1,597,399 - PGA1_c15320 0.54 +0.7 1,597,437 + PGA1_c15320 0.57 -0.4 1,597,437 + PGA1_c15320 0.57 -1.4 1,597,437 + PGA1_c15320 0.57 -1.1 1,597,445 - PGA1_c15320 0.58 -1.4 1,597,535 - PGA1_c15320 0.66 -0.4 1,597,738 - PGA1_c15320 0.83 +2.3 1,597,743 - PGA1_c15320 0.83 -1.7 1,597,784 - PGA1_c15320 0.87 +0.8 1,597,784 - PGA1_c15320 0.87 +0.2 1,597,957 + PGA1_c15330 0.11 +1.0 1,597,965 - PGA1_c15330 0.14 +0.9 1,598,007 + PGA1_c15330 0.31 +0.7 1,598,056 - PGA1_c15330 0.51 -0.7 1,598,118 + PGA1_c15330 0.76 +0.5 1,599,000 + +0.4 1,599,000 + +0.3
Or see this region's nucleotide sequence