Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c14690 and PGA1_c14700 are separated by 51 nucleotides PGA1_c14700 and PGA1_c14710 are separated by 216 nucleotides PGA1_c14710 and PGA1_c14720 are separated by 73 nucleotides
PGA1_c14690: PGA1_c14690 - putative hydrolase, at 1,523,207 to 1,524,349
_c14690
PGA1_c14700: PGA1_c14700 - hypothetical protein, at 1,524,401 to 1,524,727
_c14700
PGA1_c14710: PGA1_c14710 - hypoxanthine-guanine phosphoribosyltransferase Hpt, at 1,524,944 to 1,525,489
_c14710
PGA1_c14720: PGA1_c14720 - Oligoketide cyclase/lipid transport protein, at 1,525,563 to 1,526,009
_c14720
Position (kb) 1524
1525 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1523.415 kb on + strand, within PGA1_c14690 at 1523.461 kb on - strand, within PGA1_c14690 at 1523.466 kb on - strand, within PGA1_c14690 at 1523.491 kb on + strand, within PGA1_c14690 at 1523.609 kb on - strand, within PGA1_c14690 at 1523.660 kb on + strand, within PGA1_c14690 at 1523.668 kb on - strand, within PGA1_c14690 at 1523.668 kb on - strand, within PGA1_c14690 at 1523.668 kb on - strand, within PGA1_c14690 at 1523.668 kb on - strand, within PGA1_c14690 at 1523.668 kb on - strand, within PGA1_c14690 at 1523.710 kb on + strand, within PGA1_c14690 at 1523.899 kb on + strand, within PGA1_c14690 at 1523.903 kb on - strand, within PGA1_c14690 at 1523.948 kb on + strand, within PGA1_c14690 at 1523.958 kb on + strand, within PGA1_c14690 at 1524.018 kb on - strand, within PGA1_c14690 at 1524.047 kb on + strand, within PGA1_c14690 at 1524.061 kb on - strand, within PGA1_c14690 at 1524.169 kb on + strand, within PGA1_c14690 at 1524.175 kb on + strand, within PGA1_c14690 at 1524.175 kb on + strand, within PGA1_c14690 at 1524.175 kb on + strand, within PGA1_c14690 at 1524.427 kb on - strand at 1524.460 kb on - strand, within PGA1_c14700 at 1524.463 kb on - strand, within PGA1_c14700 at 1524.500 kb on + strand, within PGA1_c14700 at 1524.508 kb on - strand, within PGA1_c14700 at 1524.620 kb on + strand, within PGA1_c14700 at 1524.653 kb on - strand, within PGA1_c14700 at 1524.699 kb on - strand at 1524.711 kb on + strand at 1524.764 kb on + strand at 1524.828 kb on - strand at 1524.861 kb on - strand at 1525.050 kb on - strand, within PGA1_c14710 at 1525.128 kb on - strand, within PGA1_c14710 at 1525.146 kb on + strand, within PGA1_c14710 at 1525.170 kb on - strand, within PGA1_c14710 at 1525.378 kb on + strand, within PGA1_c14710 at 1525.421 kb on - strand, within PGA1_c14710 at 1525.559 kb on + strand at 1525.592 kb on + strand at 1525.600 kb on - strand at 1525.610 kb on - strand, within PGA1_c14720
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,523,415 + PGA1_c14690 0.18 -0.1 1,523,461 - PGA1_c14690 0.22 -1.9 1,523,466 - PGA1_c14690 0.23 -0.3 1,523,491 + PGA1_c14690 0.25 -0.8 1,523,609 - PGA1_c14690 0.35 -0.1 1,523,660 + PGA1_c14690 0.40 -1.9 1,523,668 - PGA1_c14690 0.40 +1.7 1,523,668 - PGA1_c14690 0.40 -1.4 1,523,668 - PGA1_c14690 0.40 -1.3 1,523,668 - PGA1_c14690 0.40 +0.7 1,523,668 - PGA1_c14690 0.40 +0.5 1,523,710 + PGA1_c14690 0.44 +1.2 1,523,899 + PGA1_c14690 0.61 -0.3 1,523,903 - PGA1_c14690 0.61 -0.1 1,523,948 + PGA1_c14690 0.65 -1.9 1,523,958 + PGA1_c14690 0.66 -0.1 1,524,018 - PGA1_c14690 0.71 +0.9 1,524,047 + PGA1_c14690 0.73 +0.4 1,524,061 - PGA1_c14690 0.75 -0.3 1,524,169 + PGA1_c14690 0.84 -0.2 1,524,175 + PGA1_c14690 0.85 -1.7 1,524,175 + PGA1_c14690 0.85 -2.3 1,524,175 + PGA1_c14690 0.85 -0.4 1,524,427 - -0.3 1,524,460 - PGA1_c14700 0.18 +1.4 1,524,463 - PGA1_c14700 0.19 +0.3 1,524,500 + PGA1_c14700 0.30 +3.1 1,524,508 - PGA1_c14700 0.33 +1.4 1,524,620 + PGA1_c14700 0.67 -1.4 1,524,653 - PGA1_c14700 0.77 +1.0 1,524,699 - -1.1 1,524,711 + +0.1 1,524,764 + +0.9 1,524,828 - +0.9 1,524,861 - -1.1 1,525,050 - PGA1_c14710 0.19 +0.0 1,525,128 - PGA1_c14710 0.34 -2.6 1,525,146 + PGA1_c14710 0.37 -1.1 1,525,170 - PGA1_c14710 0.41 +0.6 1,525,378 + PGA1_c14710 0.79 +0.5 1,525,421 - PGA1_c14710 0.87 +1.1 1,525,559 + +0.9 1,525,592 + +0.3 1,525,600 - +1.9 1,525,610 - PGA1_c14720 0.11 -0.3
Or see this region's nucleotide sequence