Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13780

Experiment: m.b. Cisplatin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cisplatin 0.025 mg/ml
1,422,469	+		PGA1_c13770	0.31	-0.5
1,422,516	+		PGA1_c13770	0.35	-2.8
1,422,527	+		PGA1_c13770	0.35	+0.6
1,422,626	+		PGA1_c13770	0.43	+1.0
1,422,669	+		PGA1_c13770	0.46	+1.1
1,422,679	+		PGA1_c13770	0.47	-0.1
1,422,679	+		PGA1_c13770	0.47	-1.1
1,422,697	-		PGA1_c13770	0.48	-0.7
1,422,702	-		PGA1_c13770	0.48	+1.2
1,422,734	+		PGA1_c13770	0.51	+0.3
1,422,742	-		PGA1_c13770	0.51	+0.8
1,422,763	-		PGA1_c13770	0.53	-0.8
1,422,822	-		PGA1_c13770	0.57	+0.1
1,422,824	+		PGA1_c13770	0.57	-0.1
1,422,928	-		PGA1_c13770	0.65	-1.7
1,422,936	-		PGA1_c13770	0.66	-1.1
1,422,946	-		PGA1_c13770	0.66	-0.4
1,422,955	+		PGA1_c13770	0.67	+0.6
1,423,063	+		PGA1_c13770	0.75	+1.3
1,423,134	+		PGA1_c13770	0.80	+0.4
1,423,142	-		PGA1_c13770	0.81	+0.3
1,423,151	+		PGA1_c13770	0.81	-0.7
1,423,151	+		PGA1_c13770	0.81	+1.5
1,423,173	-		PGA1_c13770	0.83	-1.0
1,423,185	-		PGA1_c13770	0.84	-1.1
1,423,214	+		PGA1_c13770	0.86	-2.8
1,423,222	-		PGA1_c13770	0.87	+0.5
1,423,222	-		PGA1_c13770	0.87	+0.9
1,423,224	-		PGA1_c13770	0.87	+0.0
1,423,261	+		PGA1_c13770	0.89	-0.6
1,423,293	+				+1.1
1,423,321	+				+0.1
1,423,366	-				-0.2
1,423,393	+				-1.6
1,423,404	+				+0.8
1,423,461	+				-0.7
1,423,505	+				-1.2
1,423,508	-				+0.3
1,423,513	-				+1.5
1,423,513	-				-0.3
1,423,515	+				-1.3
1,423,515	+				-1.1
1,423,515	+				+0.4
1,423,515	+				+0.5
1,423,515	+				+0.7
1,423,515	+				+1.0
1,423,515	+				-1.2
1,423,518	-				-0.4
1,423,523	-				-0.1
1,423,523	-				+3.5
1,423,523	-				-0.2
1,423,523	-				+2.3
1,423,523	-				+0.5
1,423,523	-				+0.9
1,423,523	-				+1.6
1,423,523	-				+0.2
1,423,523	-				-1.1
1,423,523	-				-2.6
1,423,523	-				-0.7
1,423,523	-				+0.9
1,423,523	-				+0.1
1,423,554	+				-0.4
1,423,597	+				-1.0
1,423,643	+		PGA1_c13780	0.13	+0.4
1,423,679	-		PGA1_c13780	0.15	+1.0
1,423,697	-		PGA1_c13780	0.16	-0.3
1,423,697	-		PGA1_c13780	0.16	+0.9
1,423,710	-		PGA1_c13780	0.17	-1.8
1,423,787	+		PGA1_c13780	0.22	+1.2
1,423,871	+		PGA1_c13780	0.27	-1.0
1,423,896	+		PGA1_c13780	0.29	+0.6
1,423,904	-		PGA1_c13780	0.29	+0.5
1,423,926	+		PGA1_c13780	0.31	-2.6
1,423,934	+		PGA1_c13780	0.31	+0.7
1,423,947	+		PGA1_c13780	0.32	+0.1
1,423,968	-		PGA1_c13780	0.33	-0.1
1,423,983	+		PGA1_c13780	0.34	+2.4
1,423,988	+		PGA1_c13780	0.35	-1.9
1,423,996	-		PGA1_c13780	0.35	+0.2
1,424,018	-		PGA1_c13780	0.36	-0.4
1,424,025	+		PGA1_c13780	0.37	-0.7
1,424,025	+		PGA1_c13780	0.37	+1.1
1,424,037	+		PGA1_c13780	0.38	+1.2
1,424,045	-		PGA1_c13780	0.38	-1.0
1,424,045	-		PGA1_c13780	0.38	-0.2
1,424,047	+		PGA1_c13780	0.38	+0.4
1,424,065	-		PGA1_c13780	0.39	+0.2
1,424,096	-		PGA1_c13780	0.41	+1.1
1,424,096	-		PGA1_c13780	0.41	-0.2
1,424,096	-		PGA1_c13780	0.41	+1.4
1,424,122	-		PGA1_c13780	0.43	+0.6
1,424,124	+		PGA1_c13780	0.43	-0.3
1,424,124	+		PGA1_c13780	0.43	+1.1
1,424,137	-		PGA1_c13780	0.44	-1.1
1,424,147	-		PGA1_c13780	0.45	+0.2
1,424,168	-		PGA1_c13780	0.46	+0.1
1,424,179	+		PGA1_c13780	0.47	+1.0
1,424,184	+		PGA1_c13780	0.47	+0.5
1,424,197	-		PGA1_c13780	0.48	+0.4
1,424,266	+		PGA1_c13780	0.52	+0.5
1,424,284	-		PGA1_c13780	0.53	+0.2
1,424,284	-		PGA1_c13780	0.53	+2.1
1,424,304	-		PGA1_c13780	0.55	-0.4
1,424,304	-		PGA1_c13780	0.55	+1.4
1,424,313	+		PGA1_c13780	0.55	+0.2
1,424,313	+		PGA1_c13780	0.55	+0.5
1,424,313	+		PGA1_c13780	0.55	+0.1
1,424,318	+		PGA1_c13780	0.56	+0.7
1,424,321	-		PGA1_c13780	0.56	+0.6
1,424,337	-		PGA1_c13780	0.57	-0.2
1,424,344	-		PGA1_c13780	0.57	+0.9
1,424,453	-		PGA1_c13780	0.64	-1.7
1,424,479	+		PGA1_c13780	0.66	+1.0
1,424,479	+		PGA1_c13780	0.66	+0.5
1,424,479	+		PGA1_c13780	0.66	+0.7
1,424,490	+		PGA1_c13780	0.66	-0.8
1,424,498	-		PGA1_c13780	0.67	+0.9
1,424,530	+		PGA1_c13780	0.69	-2.6
1,424,535	+		PGA1_c13780	0.69	-0.4
1,424,540	+		PGA1_c13780	0.70	+1.5
1,424,587	-		PGA1_c13780	0.73	-1.1
1,424,609	+		PGA1_c13780	0.74	-1.8
1,424,641	+		PGA1_c13780	0.76	+0.0
1,424,641	+		PGA1_c13780	0.76	+1.6
1,424,703	-		PGA1_c13780	0.80	+0.3
1,424,706	-		PGA1_c13780	0.80	-0.1
1,424,710	+		PGA1_c13780	0.80	+0.2
1,424,710	+		PGA1_c13780	0.80	+0.5
1,424,713	-		PGA1_c13780	0.81	-0.0
1,424,713	-		PGA1_c13780	0.81	+0.1
1,424,718	-		PGA1_c13780	0.81	-2.7
1,424,729	+		PGA1_c13780	0.82	-0.4
1,424,762	+		PGA1_c13780	0.84	-1.6
1,424,785	+		PGA1_c13780	0.85	+0.8
1,424,804	-		PGA1_c13780	0.86	+0.2
1,424,913	+				+1.6
1,424,921	-				+1.9
1,424,921	-				-2.8
1,424,931	-				+0.1
1,424,990	+				+0.0
1,425,028	+				+0.1
1,425,050	-				-0.3
1,425,060	-				-1.0
1,425,072	-				-1.1
1,425,155	+		PGA1_c13790	0.10	-2.3
1,425,164	+		PGA1_c13790	0.11	-0.7
1,425,172	-		PGA1_c13790	0.11	+2.1
1,425,182	+		PGA1_c13790	0.12	+1.5
1,425,182	-		PGA1_c13790	0.12	-1.3
1,425,213	+		PGA1_c13790	0.14	-0.1
1,425,223	+		PGA1_c13790	0.15	-1.1
1,425,317	+		PGA1_c13790	0.22	+0.6
1,425,335	+		PGA1_c13790	0.23	+0.1
1,425,396	+		PGA1_c13790	0.27	+0.4
1,425,441	+		PGA1_c13790	0.30	+1.1
1,425,510	-		PGA1_c13790	0.35	-2.1
1,425,568	-		PGA1_c13790	0.39	-0.2
1,425,568	-		PGA1_c13790	0.39	-0.3
1,425,573	-		PGA1_c13790	0.40	-0.7
1,425,626	+		PGA1_c13790	0.43	+1.0
1,425,634	-		PGA1_c13790	0.44	+0.4
1,425,652	-		PGA1_c13790	0.45	+0.1
1,425,666	+		PGA1_c13790	0.46	-0.5
1,425,741	-		PGA1_c13790	0.52	-0.6
1,425,741	-		PGA1_c13790	0.52	+0.3
1,425,753	-		PGA1_c13790	0.52	+0.1
1,425,883	-		PGA1_c13790	0.62	-0.9
1,425,919	-		PGA1_c13790	0.64	-0.7
1,425,919	-		PGA1_c13790	0.64	-0.7
1,425,922	-		PGA1_c13790	0.64	-1.1
1,425,929	+		PGA1_c13790	0.65	+0.0
1,425,937	-		PGA1_c13790	0.65	-0.5
1,425,942	-		PGA1_c13790	0.66	-0.7
1,425,992	+		PGA1_c13790	0.69	+1.3
1,425,992	+		PGA1_c13790	0.69	-0.1
1,426,000	-		PGA1_c13790	0.70	-0.8
1,426,000	-		PGA1_c13790	0.70	+1.2
1,426,000	-		PGA1_c13790	0.70	+1.1
1,426,002	+		PGA1_c13790	0.70	-0.6