Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c12350 and PGA1_c12360 are separated by 81 nucleotides PGA1_c12360 and PGA1_c12370 are separated by 103 nucleotides
PGA1_c12350: PGA1_c12350 - acetolactate synthase, catabolic, at 1,284,241 to 1,285,905
_c12350
PGA1_c12360: PGA1_c12360 - Uncharacterized conserved protein, at 1,285,987 to 1,286,526
_c12360
PGA1_c12370: PGA1_c12370 - YeeE/YedE family (DUF395)., at 1,286,630 to 1,287,700
_c12370
Position (kb)
1285
1286
1287 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1285.044 kb on + strand, within PGA1_c12350 at 1285.127 kb on - strand, within PGA1_c12350 at 1285.171 kb on - strand, within PGA1_c12350 at 1285.256 kb on - strand, within PGA1_c12350 at 1285.306 kb on + strand, within PGA1_c12350 at 1285.329 kb on + strand, within PGA1_c12350 at 1285.334 kb on + strand, within PGA1_c12350 at 1285.402 kb on + strand, within PGA1_c12350 at 1285.438 kb on + strand, within PGA1_c12350 at 1285.438 kb on + strand, within PGA1_c12350 at 1285.446 kb on - strand, within PGA1_c12350 at 1285.475 kb on + strand, within PGA1_c12350 at 1285.482 kb on + strand, within PGA1_c12350 at 1285.483 kb on - strand, within PGA1_c12350 at 1285.563 kb on + strand, within PGA1_c12350 at 1285.563 kb on + strand, within PGA1_c12350 at 1285.600 kb on + strand, within PGA1_c12350 at 1285.608 kb on - strand, within PGA1_c12350 at 1285.623 kb on + strand, within PGA1_c12350 at 1285.631 kb on - strand, within PGA1_c12350 at 1285.647 kb on + strand, within PGA1_c12350 at 1285.695 kb on - strand, within PGA1_c12350 at 1285.767 kb on - strand at 1285.856 kb on - strand at 1285.864 kb on - strand at 1285.916 kb on - strand at 1285.916 kb on - strand at 1285.926 kb on - strand at 1285.976 kb on - strand at 1285.984 kb on + strand at 1285.984 kb on + strand at 1286.001 kb on + strand at 1286.016 kb on - strand at 1286.029 kb on + strand at 1286.045 kb on + strand, within PGA1_c12360 at 1286.061 kb on + strand, within PGA1_c12360 at 1286.061 kb on + strand, within PGA1_c12360 at 1286.066 kb on + strand, within PGA1_c12360 at 1286.072 kb on + strand, within PGA1_c12360 at 1286.074 kb on - strand, within PGA1_c12360 at 1286.084 kb on - strand, within PGA1_c12360 at 1286.084 kb on - strand, within PGA1_c12360 at 1286.095 kb on + strand, within PGA1_c12360 at 1286.161 kb on + strand, within PGA1_c12360 at 1286.218 kb on - strand, within PGA1_c12360 at 1286.219 kb on + strand, within PGA1_c12360 at 1286.227 kb on - strand, within PGA1_c12360 at 1286.281 kb on + strand, within PGA1_c12360 at 1286.289 kb on - strand, within PGA1_c12360 at 1286.354 kb on + strand, within PGA1_c12360 at 1286.354 kb on + strand, within PGA1_c12360 at 1286.362 kb on - strand, within PGA1_c12360 at 1286.384 kb on - strand, within PGA1_c12360 at 1286.441 kb on - strand, within PGA1_c12360 at 1286.524 kb on - strand at 1286.525 kb on + strand at 1286.538 kb on + strand at 1286.554 kb on + strand at 1286.554 kb on + strand at 1286.610 kb on + strand at 1286.627 kb on + strand at 1286.668 kb on + strand at 1286.757 kb on + strand, within PGA1_c12370 at 1286.757 kb on - strand, within PGA1_c12370 at 1286.830 kb on + strand, within PGA1_c12370 at 1286.874 kb on + strand, within PGA1_c12370 at 1286.961 kb on - strand, within PGA1_c12370 at 1286.966 kb on + strand, within PGA1_c12370 at 1286.966 kb on + strand, within PGA1_c12370 at 1286.966 kb on + strand, within PGA1_c12370 at 1286.974 kb on - strand, within PGA1_c12370 at 1286.974 kb on - strand, within PGA1_c12370 at 1287.040 kb on - strand, within PGA1_c12370 at 1287.083 kb on + strand, within PGA1_c12370 at 1287.158 kb on + strand, within PGA1_c12370 at 1287.291 kb on + strand, within PGA1_c12370 at 1287.303 kb on + strand, within PGA1_c12370 at 1287.316 kb on - strand, within PGA1_c12370 at 1287.334 kb on + strand, within PGA1_c12370 at 1287.341 kb on + strand, within PGA1_c12370 at 1287.462 kb on - strand, within PGA1_c12370 at 1287.474 kb on + strand, within PGA1_c12370 at 1287.479 kb on + strand, within PGA1_c12370 at 1287.479 kb on + strand, within PGA1_c12370 at 1287.479 kb on + strand, within PGA1_c12370 at 1287.487 kb on - strand, within PGA1_c12370 at 1287.487 kb on - strand, within PGA1_c12370 at 1287.493 kb on + strand, within PGA1_c12370
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,285,044 + PGA1_c12350 0.48 +0.3 1,285,127 - PGA1_c12350 0.53 -1.0 1,285,171 - PGA1_c12350 0.56 +1.4 1,285,256 - PGA1_c12350 0.61 +1.0 1,285,306 + PGA1_c12350 0.64 -0.1 1,285,329 + PGA1_c12350 0.65 +0.4 1,285,334 + PGA1_c12350 0.66 +1.4 1,285,402 + PGA1_c12350 0.70 -0.7 1,285,438 + PGA1_c12350 0.72 -1.4 1,285,438 + PGA1_c12350 0.72 +0.3 1,285,446 - PGA1_c12350 0.72 +0.2 1,285,475 + PGA1_c12350 0.74 -1.9 1,285,482 + PGA1_c12350 0.75 +0.2 1,285,483 - PGA1_c12350 0.75 -1.4 1,285,563 + PGA1_c12350 0.79 +0.2 1,285,563 + PGA1_c12350 0.79 +0.2 1,285,600 + PGA1_c12350 0.82 -0.6 1,285,608 - PGA1_c12350 0.82 +1.4 1,285,623 + PGA1_c12350 0.83 +0.2 1,285,631 - PGA1_c12350 0.83 +0.5 1,285,647 + PGA1_c12350 0.84 +0.6 1,285,695 - PGA1_c12350 0.87 +0.8 1,285,767 - -0.1 1,285,856 - +0.4 1,285,864 - +0.3 1,285,916 - -2.6 1,285,916 - +0.3 1,285,926 - -0.8 1,285,976 - +0.1 1,285,984 + +0.6 1,285,984 + -0.8 1,286,001 + -0.1 1,286,016 - -1.7 1,286,029 + +0.4 1,286,045 + PGA1_c12360 0.11 +0.1 1,286,061 + PGA1_c12360 0.14 +0.1 1,286,061 + PGA1_c12360 0.14 +0.9 1,286,066 + PGA1_c12360 0.15 -0.7 1,286,072 + PGA1_c12360 0.16 -0.3 1,286,074 - PGA1_c12360 0.16 -0.7 1,286,084 - PGA1_c12360 0.18 +0.6 1,286,084 - PGA1_c12360 0.18 +3.3 1,286,095 + PGA1_c12360 0.20 +0.4 1,286,161 + PGA1_c12360 0.32 +0.3 1,286,218 - PGA1_c12360 0.43 +0.1 1,286,219 + PGA1_c12360 0.43 +0.7 1,286,227 - PGA1_c12360 0.44 -2.1 1,286,281 + PGA1_c12360 0.54 +1.7 1,286,289 - PGA1_c12360 0.56 +0.7 1,286,354 + PGA1_c12360 0.68 -0.0 1,286,354 + PGA1_c12360 0.68 +0.7 1,286,362 - PGA1_c12360 0.69 +0.7 1,286,384 - PGA1_c12360 0.74 -0.7 1,286,441 - PGA1_c12360 0.84 +0.5 1,286,524 - -0.7 1,286,525 + +0.6 1,286,538 + -0.7 1,286,554 + -0.4 1,286,554 + +1.6 1,286,610 + -0.4 1,286,627 + +0.9 1,286,668 + -2.3 1,286,757 + PGA1_c12370 0.12 +0.1 1,286,757 - PGA1_c12370 0.12 -2.9 1,286,830 + PGA1_c12370 0.19 -2.6 1,286,874 + PGA1_c12370 0.23 -0.9 1,286,961 - PGA1_c12370 0.31 +2.8 1,286,966 + PGA1_c12370 0.31 +1.1 1,286,966 + PGA1_c12370 0.31 +0.8 1,286,966 + PGA1_c12370 0.31 +2.1 1,286,974 - PGA1_c12370 0.32 -1.3 1,286,974 - PGA1_c12370 0.32 +0.2 1,287,040 - PGA1_c12370 0.38 +1.2 1,287,083 + PGA1_c12370 0.42 +1.0 1,287,158 + PGA1_c12370 0.49 +0.6 1,287,291 + PGA1_c12370 0.62 -0.1 1,287,303 + PGA1_c12370 0.63 +0.9 1,287,316 - PGA1_c12370 0.64 +1.2 1,287,334 + PGA1_c12370 0.66 -0.7 1,287,341 + PGA1_c12370 0.66 -0.1 1,287,462 - PGA1_c12370 0.78 +0.7 1,287,474 + PGA1_c12370 0.79 +1.0 1,287,479 + PGA1_c12370 0.79 -1.3 1,287,479 + PGA1_c12370 0.79 -1.7 1,287,479 + PGA1_c12370 0.79 +1.7 1,287,487 - PGA1_c12370 0.80 -0.7 1,287,487 - PGA1_c12370 0.80 +0.9 1,287,493 + PGA1_c12370 0.81 -0.1
Or see this region's nucleotide sequence