Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06050

Experiment: L-Asparagine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06045 and BWI76_RS06050 overlap by 1 nucleotidesBWI76_RS06050 and BWI76_RS06055 are separated by 84 nucleotides BWI76_RS06045: BWI76_RS06045 - hypothetical protein, at 1,270,058 to 1,271,089 _RS06045 BWI76_RS06050: BWI76_RS06050 - MFS transporter family glucose-6-phosphate receptor UhpC, at 1,271,089 to 1,272,390 _RS06050 BWI76_RS06055: BWI76_RS06055 - MASE1 sensor histidine kinase, at 1,272,475 to 1,274,016 _RS06055 Position (kb) 1271 1272 1273Strain fitness (log2 ratio) -1 0 1at 1270.102 kb on - strandat 1270.158 kb on - strandat 1270.158 kb on - strandat 1270.560 kb on + strand, within BWI76_RS06045at 1270.568 kb on - strand, within BWI76_RS06045at 1270.625 kb on - strand, within BWI76_RS06045at 1270.721 kb on - strand, within BWI76_RS06045at 1270.736 kb on - strand, within BWI76_RS06045at 1270.892 kb on - strand, within BWI76_RS06045at 1271.579 kb on + strand, within BWI76_RS06050at 1271.579 kb on - strand, within BWI76_RS06050at 1271.608 kb on - strand, within BWI76_RS06050at 1271.804 kb on + strand, within BWI76_RS06050at 1271.951 kb on - strandat 1271.990 kb on - strand, within BWI76_RS06050at 1272.008 kb on + strand, within BWI76_RS06050at 1272.205 kb on - strand, within BWI76_RS06050at 1272.238 kb on - strand, within BWI76_RS06050at 1272.456 kb on + strandat 1272.544 kb on + strandat 1272.563 kb on + strandat 1272.642 kb on + strand, within BWI76_RS06055at 1272.666 kb on + strand, within BWI76_RS06055at 1272.721 kb on + strand, within BWI76_RS06055at 1273.045 kb on + strand, within BWI76_RS06055

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (N)
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1,270,102 - +0.4
1,270,158 - +0.3
1,270,158 - -0.0
1,270,560 + BWI76_RS06045 0.49 -0.8
1,270,568 - BWI76_RS06045 0.49 -0.6
1,270,625 - BWI76_RS06045 0.55 -0.8
1,270,721 - BWI76_RS06045 0.64 +0.3
1,270,736 - BWI76_RS06045 0.66 -0.5
1,270,892 - BWI76_RS06045 0.81 +0.5
1,271,579 + BWI76_RS06050 0.38 +0.1
1,271,579 - BWI76_RS06050 0.38 -1.0
1,271,608 - BWI76_RS06050 0.40 -1.0
1,271,804 + BWI76_RS06050 0.55 -0.5
1,271,951 - +1.5
1,271,990 - BWI76_RS06050 0.69 +1.7
1,272,008 + BWI76_RS06050 0.71 -1.0
1,272,205 - BWI76_RS06050 0.86 -1.4
1,272,238 - BWI76_RS06050 0.88 +0.4
1,272,456 + -0.9
1,272,544 + -0.6
1,272,563 + +0.4
1,272,642 + BWI76_RS06055 0.11 +0.1
1,272,666 + BWI76_RS06055 0.12 +0.5
1,272,721 + BWI76_RS06055 0.16 +0.1
1,273,045 + BWI76_RS06055 0.37 -0.3

Or see this region's nucleotide sequence