Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2524 and DvMF_2525 are separated by 18 nucleotides DvMF_2525 and DvMF_2526 are separated by 12 nucleotides DvMF_2526 and DvMF_2527 overlap by 25 nucleotides DvMF_2527 and DvMF_2528 are separated by 166 nucleotides
DvMF_2524: DvMF_2524 - flagellar hook-associated protein FlgK (RefSeq), at 3,182,218 to 3,184,326
_2524
DvMF_2525: DvMF_2525 - flagellar hook-associated protein 3 (RefSeq), at 3,184,345 to 3,185,868
_2525
DvMF_2526: DvMF_2526 - carbon storage regulator, CsrA (RefSeq), at 3,185,881 to 3,186,120
_2526
DvMF_2527: DvMF_2527 - flagellar assembly protein FliW (RefSeq), at 3,186,096 to 3,186,647
_2527
DvMF_2528: DvMF_2528 - transcriptional regulator, NifA subfamily, Fis Family (RefSeq), at 3,186,814 to 3,188,553
_2528
Position (kb)
3184
3185
3186 Strain fitness (log2 ratio)
-2
-1
0
1 at 3183.474 kb on - strand, within DvMF_2524 at 3183.561 kb on - strand, within DvMF_2524 at 3183.758 kb on - strand, within DvMF_2524 at 3183.758 kb on - strand, within DvMF_2524 at 3183.797 kb on + strand, within DvMF_2524 at 3184.063 kb on - strand, within DvMF_2524 at 3184.596 kb on + strand, within DvMF_2525 at 3184.722 kb on + strand, within DvMF_2525 at 3184.822 kb on - strand, within DvMF_2525 at 3185.111 kb on - strand, within DvMF_2525 at 3185.483 kb on + strand, within DvMF_2525 at 3185.500 kb on + strand, within DvMF_2525 at 3185.747 kb on + strand at 3185.967 kb on + strand, within DvMF_2526 at 3186.155 kb on + strand, within DvMF_2527 at 3186.327 kb on - strand, within DvMF_2527 at 3186.818 kb on - strand at 3186.848 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,183,474 - DvMF_2524 0.60 -0.5 3,183,561 - DvMF_2524 0.64 -0.8 3,183,758 - DvMF_2524 0.73 -1.9 3,183,758 - DvMF_2524 0.73 -1.0 3,183,797 + DvMF_2524 0.75 -1.4 3,184,063 - DvMF_2524 0.87 -1.5 3,184,596 + DvMF_2525 0.16 -1.3 3,184,722 + DvMF_2525 0.25 -2.4 3,184,822 - DvMF_2525 0.31 -1.1 3,185,111 - DvMF_2525 0.50 -2.3 3,185,483 + DvMF_2525 0.75 -1.8 3,185,500 + DvMF_2525 0.76 -1.9 3,185,747 + -0.8 3,185,967 + DvMF_2526 0.36 -0.7 3,186,155 + DvMF_2527 0.11 -0.6 3,186,327 - DvMF_2527 0.42 -1.2 3,186,818 - -0.7 3,186,848 + -1.0
Or see this region's nucleotide sequence