Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1791 and DvMF_1792 are separated by 0 nucleotides DvMF_1792 and DvMF_1793 are separated by 53 nucleotides DvMF_1793 and DvMF_1794 are separated by 254 nucleotides
DvMF_1791: DvMF_1791 - 2-isopropylmalate synthase (RefSeq), at 2,190,882 to 2,192,426
_1791
DvMF_1792: DvMF_1792 - 3-isopropylmalate dehydratase large subunit (RefSeq), at 2,192,427 to 2,193,683
_1792
DvMF_1793: DvMF_1793 - 3-isopropylmalate dehydratase, small subunit (RefSeq), at 2,193,737 to 2,194,228
_1793
DvMF_1794: DvMF_1794 - 3-isopropylmalate dehydrogenase (RefSeq), at 2,194,483 to 2,195,559
_1794
Position (kb)
2192
2193
2194 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2191.664 kb on - strand, within DvMF_1791 at 2191.861 kb on - strand, within DvMF_1791 at 2192.047 kb on + strand, within DvMF_1791 at 2192.079 kb on + strand, within DvMF_1791 at 2192.184 kb on + strand, within DvMF_1791 at 2192.194 kb on - strand, within DvMF_1791 at 2192.629 kb on - strand, within DvMF_1792 at 2192.659 kb on + strand, within DvMF_1792 at 2192.752 kb on + strand, within DvMF_1792 at 2192.770 kb on - strand, within DvMF_1792 at 2192.931 kb on + strand, within DvMF_1792 at 2192.941 kb on - strand, within DvMF_1792 at 2192.947 kb on + strand, within DvMF_1792 at 2193.206 kb on + strand, within DvMF_1792 at 2193.383 kb on + strand, within DvMF_1792 at 2193.431 kb on + strand, within DvMF_1792 at 2193.536 kb on + strand, within DvMF_1792 at 2193.833 kb on - strand, within DvMF_1793 at 2193.855 kb on + strand, within DvMF_1793 at 2194.210 kb on - strand at 2194.247 kb on - strand at 2194.247 kb on - strand at 2194.399 kb on + strand at 2194.616 kb on - strand, within DvMF_1794
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 2,191,664 - DvMF_1791 0.51 -2.2 2,191,861 - DvMF_1791 0.63 -4.8 2,192,047 + DvMF_1791 0.75 -3.5 2,192,079 + DvMF_1791 0.77 -2.8 2,192,184 + DvMF_1791 0.84 -3.9 2,192,194 - DvMF_1791 0.85 -3.3 2,192,629 - DvMF_1792 0.16 -4.1 2,192,659 + DvMF_1792 0.18 -3.6 2,192,752 + DvMF_1792 0.26 -2.6 2,192,770 - DvMF_1792 0.27 -3.7 2,192,931 + DvMF_1792 0.40 -3.7 2,192,941 - DvMF_1792 0.41 -3.5 2,192,947 + DvMF_1792 0.41 -4.6 2,193,206 + DvMF_1792 0.62 -3.0 2,193,383 + DvMF_1792 0.76 -4.3 2,193,431 + DvMF_1792 0.80 -3.7 2,193,536 + DvMF_1792 0.88 -2.1 2,193,833 - DvMF_1793 0.20 -3.2 2,193,855 + DvMF_1793 0.24 -2.1 2,194,210 - -1.3 2,194,247 - -1.0 2,194,247 - -1.3 2,194,399 + -0.9 2,194,616 - DvMF_1794 0.12 -3.1
Or see this region's nucleotide sequence