Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1016 and DvMF_1017 are separated by 121 nucleotides DvMF_1017 and DvMF_1018 are separated by 37 nucleotides DvMF_1018 and DvMF_1019 are separated by 346 nucleotides DvMF_1019 and DvMF_1020 are separated by 75 nucleotides
DvMF_1016: DvMF_1016 - FeoA family protein (RefSeq), at 1,233,893 to 1,234,150
_1016
DvMF_1017: DvMF_1017 - hypothetical protein (RefSeq), at 1,234,272 to 1,234,478
_1017
DvMF_1018: DvMF_1018 - FeoA family protein (RefSeq), at 1,234,516 to 1,234,764
_1018
DvMF_1019: DvMF_1019 - peptidase dimerisation domain protein (RefSeq), at 1,235,111 to 1,236,346
_1019
DvMF_1020: DvMF_1020 - oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq), at 1,236,422 to 1,237,498
_1020
Position (kb) 1235
1236
1237 Strain fitness (log2 ratio) -1
0
1 at 1234.292 kb on - strand at 1234.294 kb on - strand, within DvMF_1017 at 1234.423 kb on + strand, within DvMF_1017 at 1234.490 kb on - strand at 1234.545 kb on - strand, within DvMF_1018 at 1234.639 kb on + strand, within DvMF_1018 at 1235.338 kb on + strand, within DvMF_1019 at 1235.431 kb on + strand, within DvMF_1019 at 1235.673 kb on - strand, within DvMF_1019 at 1235.898 kb on - strand, within DvMF_1019 at 1235.973 kb on + strand, within DvMF_1019 at 1236.008 kb on - strand, within DvMF_1019 at 1236.234 kb on - strand at 1236.341 kb on + strand at 1236.406 kb on + strand at 1236.523 kb on + strand at 1236.592 kb on + strand, within DvMF_1020 at 1236.798 kb on - strand, within DvMF_1020 at 1236.991 kb on - strand, within DvMF_1020 at 1237.227 kb on + strand, within DvMF_1020
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,234,292 - -0.9 1,234,294 - DvMF_1017 0.11 -0.0 1,234,423 + DvMF_1017 0.73 -0.6 1,234,490 - -0.9 1,234,545 - DvMF_1018 0.12 -0.9 1,234,639 + DvMF_1018 0.49 +0.2 1,235,338 + DvMF_1019 0.18 -0.4 1,235,431 + DvMF_1019 0.26 -1.2 1,235,673 - DvMF_1019 0.45 -0.2 1,235,898 - DvMF_1019 0.64 -0.9 1,235,973 + DvMF_1019 0.70 -0.3 1,236,008 - DvMF_1019 0.73 -0.7 1,236,234 - -0.6 1,236,341 + -1.0 1,236,406 + -1.4 1,236,523 + -0.7 1,236,592 + DvMF_1020 0.16 +0.5 1,236,798 - DvMF_1020 0.35 -0.1 1,236,991 - DvMF_1020 0.53 -0.6 1,237,227 + DvMF_1020 0.75 -1.2
Or see this region's nucleotide sequence