Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0944 and DvMF_0945 are separated by 612 nucleotides DvMF_0945 and DvMF_0946 are separated by 456 nucleotides
DvMF_0944: DvMF_0944 - protein of unknown function DUF6 transmembrane (RefSeq), at 1,144,454 to 1,145,299
_0944
DvMF_0945: DvMF_0945 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,145,912 to 1,146,946
_0945
DvMF_0946: DvMF_0946 - peptidase M48 Ste24p (RefSeq), at 1,147,403 to 1,148,260
_0946
Position (kb)
1145
1146
1147 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1144.975 kb on + strand, within DvMF_0944 at 1144.983 kb on - strand, within DvMF_0944 at 1145.030 kb on - strand, within DvMF_0944 at 1145.053 kb on + strand, within DvMF_0944 at 1145.236 kb on - strand at 1145.274 kb on + strand at 1145.279 kb on + strand at 1145.383 kb on + strand at 1145.556 kb on + strand at 1145.647 kb on - strand at 1146.000 kb on + strand at 1146.024 kb on - strand, within DvMF_0945 at 1146.130 kb on - strand, within DvMF_0945 at 1146.303 kb on + strand, within DvMF_0945 at 1146.311 kb on - strand, within DvMF_0945 at 1146.492 kb on - strand, within DvMF_0945 at 1146.606 kb on - strand, within DvMF_0945 at 1146.747 kb on + strand, within DvMF_0945 at 1146.752 kb on + strand, within DvMF_0945 at 1146.752 kb on + strand, within DvMF_0945 at 1146.752 kb on + strand, within DvMF_0945 at 1146.752 kb on + strand, within DvMF_0945 at 1146.755 kb on - strand, within DvMF_0945 at 1146.760 kb on - strand, within DvMF_0945 at 1146.760 kb on - strand, within DvMF_0945 at 1146.776 kb on - strand, within DvMF_0945 at 1147.175 kb on - strand at 1147.209 kb on + strand at 1147.209 kb on + strand at 1147.217 kb on - strand at 1147.247 kb on + strand at 1147.326 kb on + strand at 1147.422 kb on - strand at 1147.516 kb on - strand, within DvMF_0946 at 1147.602 kb on + strand, within DvMF_0946 at 1147.602 kb on + strand, within DvMF_0946 at 1147.772 kb on + strand, within DvMF_0946
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,144,975 + DvMF_0944 0.62 -1.1 1,144,983 - DvMF_0944 0.63 -0.2 1,145,030 - DvMF_0944 0.68 -0.8 1,145,053 + DvMF_0944 0.71 -1.1 1,145,236 - -0.6 1,145,274 + -0.8 1,145,279 + -0.5 1,145,383 + -1.1 1,145,556 + +0.8 1,145,647 - -0.8 1,146,000 + +0.4 1,146,024 - DvMF_0945 0.11 -0.8 1,146,130 - DvMF_0945 0.21 -0.7 1,146,303 + DvMF_0945 0.38 -1.0 1,146,311 - DvMF_0945 0.39 -1.3 1,146,492 - DvMF_0945 0.56 -0.2 1,146,606 - DvMF_0945 0.67 -0.2 1,146,747 + DvMF_0945 0.81 -0.6 1,146,752 + DvMF_0945 0.81 -1.4 1,146,752 + DvMF_0945 0.81 -0.7 1,146,752 + DvMF_0945 0.81 -1.2 1,146,752 + DvMF_0945 0.81 -0.9 1,146,755 - DvMF_0945 0.81 -0.6 1,146,760 - DvMF_0945 0.82 +2.4 1,146,760 - DvMF_0945 0.82 -2.6 1,146,776 - DvMF_0945 0.83 +0.4 1,147,175 - -2.0 1,147,209 + +0.1 1,147,209 + -1.2 1,147,217 - -0.8 1,147,247 + -0.2 1,147,326 + -0.1 1,147,422 - +0.1 1,147,516 - DvMF_0946 0.13 -1.0 1,147,602 + DvMF_0946 0.23 -0.6 1,147,602 + DvMF_0946 0.23 -0.6 1,147,772 + DvMF_0946 0.43 +1.4
Or see this region's nucleotide sequence