Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0864 and DvMF_0865 are separated by 90 nucleotides DvMF_0865 and DvMF_0866 are separated by 84 nucleotides DvMF_0866 and DvMF_0867 are separated by 429 nucleotides
DvMF_0864: DvMF_0864 - UTP-GlnB uridylyltransferase, GlnD (RefSeq), at 1,040,277 to 1,043,180
_0864
DvMF_0865: DvMF_0865 - nitrogen regulatory protein P-II (RefSeq), at 1,043,271 to 1,043,609
_0865
DvMF_0866: DvMF_0866 - ammonium transporter (RefSeq), at 1,043,694 to 1,044,902
_0866
DvMF_0867: DvMF_0867 - Redoxin domain protein (RefSeq), at 1,045,332 to 1,045,844
_0867
Position (kb)
1043
1044
1045 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1042.713 kb on + strand, within DvMF_0864 at 1042.733 kb on - strand, within DvMF_0864 at 1042.738 kb on + strand, within DvMF_0864 at 1042.786 kb on + strand, within DvMF_0864 at 1042.833 kb on + strand, within DvMF_0864 at 1043.082 kb on - strand at 1043.369 kb on - strand, within DvMF_0865 at 1043.477 kb on - strand, within DvMF_0865 at 1043.523 kb on + strand, within DvMF_0865 at 1043.877 kb on - strand, within DvMF_0866 at 1043.893 kb on - strand, within DvMF_0866 at 1044.106 kb on - strand, within DvMF_0866 at 1044.185 kb on - strand, within DvMF_0866 at 1044.285 kb on + strand, within DvMF_0866 at 1044.315 kb on - strand, within DvMF_0866 at 1044.350 kb on - strand, within DvMF_0866 at 1044.397 kb on + strand, within DvMF_0866 at 1044.582 kb on - strand, within DvMF_0866 at 1044.784 kb on + strand at 1044.818 kb on - strand at 1044.828 kb on - strand at 1044.926 kb on + strand at 1044.943 kb on - strand at 1044.991 kb on - strand at 1045.274 kb on - strand at 1045.501 kb on + strand, within DvMF_0867 at 1045.558 kb on + strand, within DvMF_0867 at 1045.621 kb on - strand, within DvMF_0867 at 1045.810 kb on + strand at 1045.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 1,042,713 + DvMF_0864 0.84 -0.7 1,042,733 - DvMF_0864 0.85 -0.0 1,042,738 + DvMF_0864 0.85 -0.7 1,042,786 + DvMF_0864 0.86 -0.6 1,042,833 + DvMF_0864 0.88 -0.8 1,043,082 - -0.7 1,043,369 - DvMF_0865 0.29 -1.0 1,043,477 - DvMF_0865 0.61 -0.6 1,043,523 + DvMF_0865 0.74 -1.8 1,043,877 - DvMF_0866 0.15 -0.9 1,043,893 - DvMF_0866 0.16 -0.8 1,044,106 - DvMF_0866 0.34 -0.4 1,044,185 - DvMF_0866 0.41 -0.5 1,044,285 + DvMF_0866 0.49 -0.1 1,044,315 - DvMF_0866 0.51 -0.3 1,044,350 - DvMF_0866 0.54 +0.2 1,044,397 + DvMF_0866 0.58 -3.1 1,044,582 - DvMF_0866 0.73 -0.8 1,044,784 + -0.4 1,044,818 - +0.4 1,044,828 - -1.0 1,044,926 + -1.2 1,044,943 - +0.9 1,044,991 - -0.0 1,045,274 - -0.3 1,045,501 + DvMF_0867 0.33 -0.8 1,045,558 + DvMF_0867 0.44 +0.4 1,045,621 - DvMF_0867 0.56 +0.7 1,045,810 + -0.8 1,045,823 - -0.9
Or see this region's nucleotide sequence