Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0544 and DvMF_0545 overlap by 4 nucleotides DvMF_0545 and DvMF_0546 are separated by 216 nucleotides
DvMF_0544: DvMF_0544 - glutamate synthase alpha subunit domain protein (RefSeq), at 640,846 to 641,691
_0544
DvMF_0545: DvMF_0545 - glutamine amidotransferase class-II (RefSeq), at 641,688 to 642,797
_0545
DvMF_0546: DvMF_0546 - Glutamate synthase (NADPH) (RefSeq), at 643,014 to 644,537
_0546
Position (kb) 641
642
643 Strain fitness (log2 ratio) -2
-1
0
1
2 at 640.801 kb on + strand at 640.809 kb on - strand at 640.886 kb on + strand at 640.900 kb on - strand at 641.064 kb on + strand, within DvMF_0544 at 641.106 kb on - strand, within DvMF_0544 at 641.341 kb on - strand, within DvMF_0544 at 641.346 kb on - strand, within DvMF_0544 at 641.573 kb on - strand, within DvMF_0544 at 641.584 kb on - strand, within DvMF_0544 at 641.584 kb on - strand, within DvMF_0544 at 641.647 kb on - strand at 641.840 kb on + strand, within DvMF_0545 at 641.933 kb on - strand, within DvMF_0545 at 641.989 kb on + strand, within DvMF_0545 at 642.033 kb on - strand, within DvMF_0545 at 642.180 kb on - strand, within DvMF_0545 at 642.588 kb on - strand, within DvMF_0545 at 642.598 kb on + strand, within DvMF_0545 at 642.703 kb on - strand at 643.036 kb on - strand at 643.059 kb on + strand at 643.145 kb on - strand at 643.190 kb on - strand, within DvMF_0546 at 643.352 kb on + strand, within DvMF_0546 at 643.357 kb on + strand, within DvMF_0546 at 643.370 kb on - strand, within DvMF_0546 at 643.416 kb on + strand, within DvMF_0546 at 643.433 kb on - strand, within DvMF_0546 at 643.440 kb on - strand, within DvMF_0546 at 643.633 kb on + strand, within DvMF_0546 at 643.641 kb on - strand, within DvMF_0546
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 640,801 + -0.2 640,809 - -0.8 640,886 + -0.6 640,900 - +0.9 641,064 + DvMF_0544 0.26 -0.3 641,106 - DvMF_0544 0.31 -0.6 641,341 - DvMF_0544 0.59 +0.0 641,346 - DvMF_0544 0.59 -0.8 641,573 - DvMF_0544 0.86 -0.0 641,584 - DvMF_0544 0.87 -0.2 641,584 - DvMF_0544 0.87 -0.4 641,647 - -0.6 641,840 + DvMF_0545 0.14 +0.5 641,933 - DvMF_0545 0.22 -0.9 641,989 + DvMF_0545 0.27 -0.8 642,033 - DvMF_0545 0.31 +0.5 642,180 - DvMF_0545 0.44 -0.7 642,588 - DvMF_0545 0.81 -2.1 642,598 + DvMF_0545 0.82 +0.3 642,703 - +0.3 643,036 - -0.6 643,059 + -0.1 643,145 - -0.7 643,190 - DvMF_0546 0.12 -0.6 643,352 + DvMF_0546 0.22 +0.2 643,357 + DvMF_0546 0.23 -0.4 643,370 - DvMF_0546 0.23 -0.8 643,416 + DvMF_0546 0.26 -0.7 643,433 - DvMF_0546 0.27 +2.2 643,440 - DvMF_0546 0.28 +0.7 643,633 + DvMF_0546 0.41 -1.3 643,641 - DvMF_0546 0.41 -0.7
Or see this region's nucleotide sequence