Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3177

Experiment: m.b. Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 0.005 mg/ml
3,338,435	-				+0.1
3,338,458	+				+1.2
3,338,591	-		Dshi_3176	0.18	-0.1
3,338,617	+		Dshi_3176	0.20	-0.2
3,338,686	+		Dshi_3176	0.27	+0.5
3,338,763	+		Dshi_3176	0.35	-0.5
3,338,770	-		Dshi_3176	0.36	+0.5
3,338,797	-		Dshi_3176	0.38	+0.3
3,338,850	+		Dshi_3176	0.44	-0.6
3,338,883	+		Dshi_3176	0.47	+0.8
3,338,908	+		Dshi_3176	0.50	-0.1
3,338,931	-		Dshi_3176	0.52	-0.8
3,338,977	-		Dshi_3176	0.57	-2.0
3,338,987	-		Dshi_3176	0.58	+1.3
3,339,046	-		Dshi_3176	0.63	-0.1
3,339,068	+		Dshi_3176	0.66	-0.3
3,339,134	+		Dshi_3176	0.72	-1.4
3,339,154	-		Dshi_3176	0.74	+0.5
3,339,154	-		Dshi_3176	0.74	+0.7
3,339,293	+		Dshi_3176	0.88	-0.7
3,339,333	-				+0.6
3,339,357	+				+0.4
3,339,460	-				-0.5
3,339,463	-				-0.3
3,339,542	+		Dshi_3177	0.11	-1.7
3,339,542	+		Dshi_3177	0.11	-1.7
3,339,548	-		Dshi_3177	0.11	-0.7
3,339,596	+		Dshi_3177	0.16	+0.0
3,339,746	+		Dshi_3177	0.28	+0.3
3,339,761	+		Dshi_3177	0.30	-0.5
3,339,854	-		Dshi_3177	0.38	-0.5
3,339,910	-		Dshi_3177	0.43	-1.7
3,339,910	-		Dshi_3177	0.43	-0.9
3,339,931	-		Dshi_3177	0.44	+0.2
3,339,970	-		Dshi_3177	0.48	-0.1
3,340,086	-		Dshi_3177	0.58	-1.0
3,340,101	-		Dshi_3177	0.59	+1.5
3,340,304	+		Dshi_3177	0.76	-0.6
3,340,327	-		Dshi_3177	0.78	-0.2
3,340,399	+		Dshi_3177	0.84	+0.3
3,340,418	+		Dshi_3177	0.86	-0.6
3,340,440	+		Dshi_3177	0.88	+0.0
3,340,448	-		Dshi_3177	0.89	+0.8
3,340,489	-				-0.5
3,340,499	+				-0.4
3,340,507	-				-1.0
3,340,564	-				-1.6
3,340,567	+				-0.4
3,340,576	+				+0.8
3,340,585	-				-0.1
3,340,737	+		Dshi_3178	0.49	+0.1
3,340,737	+		Dshi_3178	0.49	+0.5
3,340,745	-		Dshi_3178	0.51	-0.3
3,340,749	+		Dshi_3178	0.53	+0.3
3,340,822	-		Dshi_3178	0.76	-0.4
3,340,863	+		Dshi_3178	0.89	+0.8
3,340,871	-				-1.5
3,340,871	-				+0.2
3,340,871	-				-1.4
3,340,871	-				+1.5
3,340,886	+				+0.0
3,340,894	-				-0.7
3,340,993	+		Dshi_3179	0.13	-0.1
3,341,124	-		Dshi_3179	0.30	+0.0
3,341,208	-		Dshi_3179	0.40	+0.1
3,341,208	-		Dshi_3179	0.40	-0.7
3,341,210	+		Dshi_3179	0.40	+0.4
3,341,224	-		Dshi_3179	0.42	-0.5
3,341,247	+		Dshi_3179	0.45	+0.2
3,341,275	-		Dshi_3179	0.49	+0.0
3,341,287	+		Dshi_3179	0.50	+1.2
3,341,407	-		Dshi_3179	0.65	-0.5
3,341,415	+		Dshi_3179	0.66	-0.1
3,341,449	-		Dshi_3179	0.70	-0.4
3,341,517	+		Dshi_3179	0.79	-0.5