Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2194

Experiment: m.b. Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 0.005 mg/ml
2,320,854	-		Dshi_2192	0.70	+0.4
2,320,891	+		Dshi_2192	0.72	+1.3
2,320,896	+		Dshi_2192	0.72	-0.3
2,320,904	-		Dshi_2192	0.72	-1.0
2,320,916	+		Dshi_2192	0.73	-0.4
2,320,924	-		Dshi_2192	0.73	+0.1
2,320,970	+		Dshi_2192	0.75	-0.7
2,321,132	+		Dshi_2192	0.83	-0.3
2,321,187	+		Dshi_2192	0.85	+0.0
2,321,364	-				-1.2
2,321,442	-				-0.6
2,321,715	+				+0.2
2,321,736	+				+0.8
2,321,758	+				-0.9
2,321,868	+				-0.6
2,321,936	+		Dshi_2194	0.21	-1.5
2,321,936	+		Dshi_2194	0.21	+0.5
2,321,954	-		Dshi_2194	0.26	-1.1
2,321,959	-		Dshi_2194	0.27	-0.3
2,322,065	+		Dshi_2194	0.55	-0.6
2,322,197	+		Dshi_2194	0.89	-0.4
2,322,197	+		Dshi_2194	0.89	-0.5
2,322,231	+				+1.3
2,322,236	+				-1.0
2,322,239	-				+0.9
2,322,257	-				+0.3
2,322,267	+				+0.1
2,322,277	+				-0.2
2,322,301	+				-0.6
2,322,301	+				-0.1
2,322,309	-				-0.4
2,322,390	+				+0.3
2,322,429	-				+0.6
2,322,458	+				-0.2
2,322,494	-				-0.0
2,322,566	-		Dshi_2195	0.43	-0.4
2,322,635	-				-0.4
2,322,658	-				+0.3
2,322,670	-				-0.4
2,322,684	-				-0.2
2,322,723	+				-1.3
2,322,736	-				-0.1
2,322,751	+				+0.3
2,322,797	-				-1.0
2,322,802	-				+0.3
2,322,805	+				-0.3
2,322,805	+				-0.4
2,322,805	+				+1.1
2,322,805	+				-0.2
2,322,813	-				+0.0
2,322,813	-				-0.7
2,322,813	-				+0.2
2,322,813	-				+0.0
2,322,818	-				-1.2
2,322,850	-				+0.6
2,322,880	-				-0.5
2,322,907	-				-0.7
2,322,911	+				-0.4
2,322,919	-				+0.6
2,322,919	-				+1.3
2,322,923	+				-0.0
2,322,923	+				-0.1
2,322,923	+				-0.2
2,322,923	+				+0.7
2,322,923	+				+0.6
2,322,923	+				-0.1
2,322,931	-				-1.8
2,322,931	-				-0.7
2,322,931	-				-0.3
2,322,931	-				+1.2
2,322,931	-				-0.1
2,322,931	-				+0.3
2,322,931	-				+1.3
2,322,931	-				-0.2
2,322,931	-				-1.0
2,322,931	-				+0.6
2,322,931	-				-0.6
2,322,934	+				+0.8
2,322,942	-				+0.8
2,322,948	+				-1.4
2,322,951	+				-1.0
2,322,951	-				+0.3
2,322,951	-				+0.1
2,322,956	-				+0.1
2,322,961	+				-0.4
2,322,961	+				-0.2
2,322,962	+				+0.7
2,322,962	+				-0.6
2,322,970	+				-1.5
2,322,970	+				-0.2
2,322,988	+				-0.8
2,323,005	+				-0.7
2,323,005	+				-0.9
2,323,022	+				-0.0
2,323,022	+				-0.7
2,323,022	+				+0.3
2,323,022	+				+1.6
2,323,022	+				-0.1
2,323,022	+				+0.7
2,323,022	+				-0.6
2,323,025	-				-0.0
2,323,029	-				-0.7
2,323,030	-				-0.0
2,323,030	-				-0.4
2,323,030	-				-0.3
2,323,030	-				+0.6
2,323,030	-				+0.4
2,323,032	+				-1.0
2,323,032	+				-0.4
2,323,032	+				-1.7
2,323,032	+				-1.3
2,323,037	-				-0.2
2,323,054	+				+0.4
2,323,054	+				+0.5
2,323,054	+				-0.2
2,323,054	+				+0.1
2,323,056	-				+0.1
2,323,062	-				-0.1
2,323,066	-				+0.0
2,323,096	+				-0.3
2,323,138	+		Dshi_2196	0.13	-0.0
2,323,147	+		Dshi_2196	0.14	+0.1
2,323,147	+		Dshi_2196	0.14	-2.0
2,323,155	-		Dshi_2196	0.14	-0.9
2,323,155	-		Dshi_2196	0.14	-0.6
2,323,155	-		Dshi_2196	0.14	-0.3
2,323,155	-				+3.3
2,323,157	+		Dshi_2196	0.15	+1.0
2,323,157	+		Dshi_2196	0.15	-0.4
2,323,157	+		Dshi_2196	0.15	+0.1
2,323,157	+		Dshi_2196	0.15	-0.5
2,323,157	+		Dshi_2196	0.15	+0.1
2,323,157	+		Dshi_2196	0.15	+0.0
2,323,157	+		Dshi_2196	0.15	-1.1
2,323,157	+		Dshi_2196	0.15	-0.5
2,323,157	+		Dshi_2196	0.15	-0.4
2,323,157	+		Dshi_2196	0.15	+0.4
2,323,157	+		Dshi_2196	0.15	-0.3
2,323,157	+		Dshi_2196	0.15	-0.1
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	+0.1
2,323,157	+		Dshi_2196	0.15	-0.7
2,323,157	+		Dshi_2196	0.15	-0.2
2,323,157	+		Dshi_2196	0.15	-0.3
2,323,157	+		Dshi_2196	0.15	+0.2
2,323,157	+		Dshi_2196	0.15	-0.9
2,323,165	-		Dshi_2196	0.15	-0.0
2,323,165	-		Dshi_2196	0.15	-1.5
2,323,165	-		Dshi_2196	0.15	-0.1
2,323,165	-		Dshi_2196	0.15	+1.0
2,323,165	-		Dshi_2196	0.15	-1.1
2,323,165	-		Dshi_2196	0.15	+0.0
2,323,165	-		Dshi_2196	0.15	+0.0
2,323,165	-		Dshi_2196	0.15	+0.8
2,323,165	-		Dshi_2196	0.15	-0.7
2,323,165	-		Dshi_2196	0.15	-0.7
2,323,165	-		Dshi_2196	0.15	+0.3
2,323,165	-		Dshi_2196	0.15	-0.4
2,323,165	-		Dshi_2196	0.15	-0.4
2,323,165	-		Dshi_2196	0.15	+0.1
2,323,165	-		Dshi_2196	0.15	+0.3
2,323,165	-		Dshi_2196	0.15	-0.6
2,323,165	-		Dshi_2196	0.15	-0.1
2,323,165	-		Dshi_2196	0.15	-0.3
2,323,165	-		Dshi_2196	0.15	-0.2
2,323,165	-		Dshi_2196	0.15	-0.3
2,323,165	-		Dshi_2196	0.15	+0.3
2,323,165	-		Dshi_2196	0.15	-0.2
2,323,165	-		Dshi_2196	0.15	-0.2
2,323,165	-		Dshi_2196	0.15	+0.3
2,323,165	-		Dshi_2196	0.15	+0.0
2,323,165	-		Dshi_2196	0.15	+0.8
2,323,165	-		Dshi_2196	0.15	-0.3
2,323,165	-		Dshi_2196	0.15	+1.5
2,323,165	-		Dshi_2196	0.15	-0.7
2,323,167	+		Dshi_2196	0.16	-1.1
2,323,175	-		Dshi_2196	0.16	+0.1
2,323,175	-		Dshi_2196	0.16	+0.3
2,323,175	-		Dshi_2196	0.16	+1.1
2,323,175	-		Dshi_2196	0.16	-0.2
2,323,175	-		Dshi_2196	0.16	-0.9
2,323,234	+				+1.7