Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1380 and Dshi_1381 overlap by 4 nucleotides Dshi_1381 and Dshi_1382 overlap by 1 nucleotides Dshi_1382 and Dshi_1383 overlap by 4 nucleotides
Dshi_1380: Dshi_1380 - FAD linked oxidase domain protein (RefSeq), at 1,432,949 to 1,434,355
_1380
Dshi_1381: Dshi_1381 - Amidohydrolase 3 (RefSeq), at 1,434,352 to 1,435,626
_1381
Dshi_1382: Dshi_1382 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 1,435,626 to 1,436,483
_1382
Dshi_1383: Dshi_1383 - ABC transporter related (RefSeq), at 1,436,480 to 1,437,289
_1383
Position (kb)
1434
1435
1436 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1433.382 kb on - strand, within Dshi_1380 at 1433.407 kb on + strand, within Dshi_1380 at 1433.934 kb on + strand, within Dshi_1380 at 1434.095 kb on - strand, within Dshi_1380 at 1434.095 kb on - strand, within Dshi_1380 at 1434.145 kb on + strand, within Dshi_1380 at 1434.145 kb on + strand, within Dshi_1380 at 1434.148 kb on - strand, within Dshi_1380 at 1434.178 kb on + strand, within Dshi_1380 at 1434.374 kb on - strand at 1434.376 kb on + strand at 1434.384 kb on - strand at 1434.425 kb on - strand at 1434.767 kb on - strand, within Dshi_1381 at 1434.808 kb on + strand, within Dshi_1381 at 1434.828 kb on + strand, within Dshi_1381 at 1434.836 kb on - strand, within Dshi_1381 at 1434.927 kb on + strand, within Dshi_1381 at 1435.074 kb on - strand, within Dshi_1381 at 1435.087 kb on + strand, within Dshi_1381 at 1435.241 kb on + strand, within Dshi_1381 at 1435.271 kb on - strand, within Dshi_1381 at 1435.293 kb on + strand, within Dshi_1381 at 1435.345 kb on + strand, within Dshi_1381 at 1435.428 kb on - strand, within Dshi_1381 at 1435.474 kb on - strand, within Dshi_1381 at 1435.489 kb on - strand, within Dshi_1381 at 1435.532 kb on + strand at 1435.542 kb on + strand at 1435.608 kb on + strand at 1435.670 kb on + strand at 1435.670 kb on + strand at 1435.699 kb on - strand at 1435.801 kb on - strand, within Dshi_1382 at 1435.897 kb on + strand, within Dshi_1382 at 1435.967 kb on + strand, within Dshi_1382 at 1435.975 kb on - strand, within Dshi_1382 at 1436.134 kb on - strand, within Dshi_1382 at 1436.318 kb on - strand, within Dshi_1382 at 1436.366 kb on - strand, within Dshi_1382 at 1436.473 kb on + strand at 1436.517 kb on - strand at 1436.562 kb on + strand, within Dshi_1383
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 1,433,382 - Dshi_1380 0.31 -0.2 1,433,407 + Dshi_1380 0.33 +0.6 1,433,934 + Dshi_1380 0.70 +1.2 1,434,095 - Dshi_1380 0.81 +0.0 1,434,095 - Dshi_1380 0.81 -0.0 1,434,145 + Dshi_1380 0.85 -0.2 1,434,145 + Dshi_1380 0.85 -0.2 1,434,148 - Dshi_1380 0.85 +1.2 1,434,178 + Dshi_1380 0.87 +0.5 1,434,374 - -0.5 1,434,376 + +0.3 1,434,384 - +0.7 1,434,425 - -0.2 1,434,767 - Dshi_1381 0.33 -1.2 1,434,808 + Dshi_1381 0.36 -0.8 1,434,828 + Dshi_1381 0.37 -0.5 1,434,836 - Dshi_1381 0.38 +0.3 1,434,927 + Dshi_1381 0.45 -1.6 1,435,074 - Dshi_1381 0.57 +1.2 1,435,087 + Dshi_1381 0.58 -0.3 1,435,241 + Dshi_1381 0.70 -0.3 1,435,271 - Dshi_1381 0.72 +0.1 1,435,293 + Dshi_1381 0.74 -1.8 1,435,345 + Dshi_1381 0.78 +0.1 1,435,428 - Dshi_1381 0.84 -0.5 1,435,474 - Dshi_1381 0.88 -0.4 1,435,489 - Dshi_1381 0.89 +0.0 1,435,532 + -0.3 1,435,542 + -1.0 1,435,608 + -0.4 1,435,670 + +0.1 1,435,670 + -0.5 1,435,699 - -0.2 1,435,801 - Dshi_1382 0.20 -1.1 1,435,897 + Dshi_1382 0.32 -0.2 1,435,967 + Dshi_1382 0.40 -0.2 1,435,975 - Dshi_1382 0.41 -0.2 1,436,134 - Dshi_1382 0.59 +0.5 1,436,318 - Dshi_1382 0.81 -0.7 1,436,366 - Dshi_1382 0.86 -0.6 1,436,473 + +1.8 1,436,517 - -0.5 1,436,562 + Dshi_1383 0.10 +0.3
Or see this region's nucleotide sequence