Experiment: m.b. Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0768 and Dshi_0769 are separated by 87 nucleotides Dshi_0769 and Dshi_0770 are separated by 220 nucleotides Dshi_0770 and Dshi_0771 overlap by 43 nucleotides Dshi_0771 and Dshi_0772 overlap by 7 nucleotides
Dshi_0768: Dshi_0768 - thymidylate synthase, flavin-dependent (RefSeq), at 775,200 to 776,117
_0768
Dshi_0769: Dshi_0769 - cold-shock DNA-binding domain protein (RefSeq), at 776,205 to 776,414
_0769
Dshi_0770: Dshi_0770 - arsenate reductase and related (RefSeq), at 776,635 to 776,946
_0770
Dshi_0771: Dshi_0771 - DoxX family protein (RefSeq), at 776,904 to 777,470
_0771
Dshi_0772: Dshi_0772 - hypothetical protein (RefSeq), at 777,464 to 778,210
_0772
Position (kb) 776
777 Strain fitness (log2 ratio) -2
-1
0
1
2 at 776.162 kb on + strand at 776.216 kb on - strand at 776.243 kb on + strand, within Dshi_0769 at 776.244 kb on + strand, within Dshi_0769 at 776.409 kb on - strand at 776.498 kb on + strand at 776.535 kb on + strand at 776.578 kb on + strand at 776.593 kb on + strand at 776.601 kb on - strand at 776.601 kb on - strand at 776.601 kb on - strand at 776.601 kb on - strand at 776.601 kb on - strand at 776.611 kb on - strand at 776.628 kb on + strand at 776.813 kb on + strand, within Dshi_0770 at 776.920 kb on - strand at 776.932 kb on - strand at 776.992 kb on + strand, within Dshi_0771 at 776.995 kb on - strand, within Dshi_0771 at 777.223 kb on + strand, within Dshi_0771 at 777.274 kb on - strand, within Dshi_0771 at 777.285 kb on + strand, within Dshi_0771 at 777.321 kb on + strand, within Dshi_0771 at 777.466 kb on + strand at 777.467 kb on + strand at 777.468 kb on + strand at 777.516 kb on + strand at 777.557 kb on + strand, within Dshi_0772 at 777.565 kb on - strand, within Dshi_0772 at 777.594 kb on + strand, within Dshi_0772 at 777.760 kb on + strand, within Dshi_0772 at 777.787 kb on + strand, within Dshi_0772 at 777.905 kb on - strand, within Dshi_0772
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 0.005 mg/ml remove 776,162 + -0.3 776,216 - -0.5 776,243 + Dshi_0769 0.18 -2.3 776,244 + Dshi_0769 0.19 -1.0 776,409 - -0.8 776,498 + -0.3 776,535 + -0.8 776,578 + +2.6 776,593 + +0.1 776,601 - -2.7 776,601 - -1.0 776,601 - -2.2 776,601 - +0.0 776,601 - +1.0 776,611 - +0.4 776,628 + +0.6 776,813 + Dshi_0770 0.57 -0.0 776,920 - -0.9 776,932 - -0.6 776,992 + Dshi_0771 0.16 -0.1 776,995 - Dshi_0771 0.16 -0.8 777,223 + Dshi_0771 0.56 -1.5 777,274 - Dshi_0771 0.65 +1.0 777,285 + Dshi_0771 0.67 -2.6 777,321 + Dshi_0771 0.74 -0.8 777,466 + -0.3 777,467 + -0.3 777,468 + +0.1 777,516 + -0.6 777,557 + Dshi_0772 0.12 -0.8 777,565 - Dshi_0772 0.14 -0.1 777,594 + Dshi_0772 0.17 -0.5 777,760 + Dshi_0772 0.40 +0.0 777,787 + Dshi_0772 0.43 -0.6 777,905 - Dshi_0772 0.59 -0.1
Or see this region's nucleotide sequence