Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05779 and H281DRAFT_05780 are separated by 64 nucleotides H281DRAFT_05780 and H281DRAFT_05781 are separated by 248 nucleotides H281DRAFT_05781 and H281DRAFT_05782 are separated by 60 nucleotides H281DRAFT_05782 and H281DRAFT_05783 are separated by 2 nucleotides
H281DRAFT_05779: H281DRAFT_05779 - flagellar motor switch protein FliM, at 52,004 to 53,002
_05779
H281DRAFT_05780: H281DRAFT_05780 - flagellar FliL protein, at 53,067 to 53,564
_05780
H281DRAFT_05781: H281DRAFT_05781 - flagellar hook-length control protein FliK, at 53,813 to 55,366
_05781
H281DRAFT_05782: H281DRAFT_05782 - flagellar FliJ protein, at 55,427 to 55,876
_05782
H281DRAFT_05783: H281DRAFT_05783 - flagellum-specific ATP synthase, at 55,879 to 57,543
_05783
Position (kb) 53
54
55
56 Strain fitness (log2 ratio) -1
0
1 at 52.890 kb on + strand, within H281DRAFT_05779 at 52.898 kb on + strand, within H281DRAFT_05779 at 52.898 kb on + strand, within H281DRAFT_05779 at 52.898 kb on + strand, within H281DRAFT_05779 at 52.899 kb on - strand, within H281DRAFT_05779 at 52.899 kb on - strand, within H281DRAFT_05779 at 52.905 kb on - strand at 53.007 kb on + strand at 53.559 kb on - strand at 53.586 kb on - strand at 53.597 kb on + strand at 53.647 kb on + strand at 53.647 kb on + strand at 53.647 kb on + strand at 53.657 kb on + strand at 53.657 kb on + strand at 53.658 kb on - strand at 53.658 kb on - strand at 53.664 kb on - strand at 53.824 kb on + strand at 53.825 kb on - strand at 53.825 kb on - strand at 53.914 kb on + strand at 53.914 kb on + strand at 54.071 kb on + strand, within H281DRAFT_05781 at 54.071 kb on + strand, within H281DRAFT_05781 at 54.072 kb on - strand, within H281DRAFT_05781 at 54.574 kb on + strand, within H281DRAFT_05781 at 54.575 kb on - strand, within H281DRAFT_05781 at 55.312 kb on + strand at 55.313 kb on - strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.366 kb on + strand at 55.367 kb on - strand at 55.367 kb on - strand at 55.367 kb on - strand at 55.367 kb on - strand at 55.367 kb on - strand at 55.367 kb on - strand at 55.367 kb on - strand at 55.367 kb on - strand at 55.367 kb on - strand at 55.980 kb on - strand at 56.025 kb on - strand at 56.025 kb on - strand at 56.085 kb on + strand, within H281DRAFT_05783 at 56.106 kb on + strand, within H281DRAFT_05783 at 56.276 kb on + strand, within H281DRAFT_05783 at 56.277 kb on - strand, within H281DRAFT_05783
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 52,890 + H281DRAFT_05779 0.89 +0.3 52,898 + H281DRAFT_05779 0.89 +0.1 52,898 + H281DRAFT_05779 0.89 +0.1 52,898 + H281DRAFT_05779 0.89 +0.6 52,899 - H281DRAFT_05779 0.90 +0.2 52,899 - H281DRAFT_05779 0.90 +0.3 52,905 - +0.6 53,007 + +0.4 53,559 - +0.2 53,586 - +0.0 53,597 + +0.3 53,647 + -0.4 53,647 + -0.0 53,647 + +0.3 53,657 + +0.4 53,657 + +0.0 53,658 - +0.3 53,658 - +0.3 53,664 - -0.3 53,824 + +0.6 53,825 - -0.2 53,825 - +0.6 53,914 + +1.4 53,914 + +0.3 54,071 + H281DRAFT_05781 0.17 +0.7 54,071 + H281DRAFT_05781 0.17 +1.3 54,072 - H281DRAFT_05781 0.17 +0.5 54,574 + H281DRAFT_05781 0.49 +0.7 54,575 - H281DRAFT_05781 0.49 +0.9 55,312 + +0.2 55,313 - +0.4 55,366 + +0.5 55,366 + +0.5 55,366 + -0.1 55,366 + +0.3 55,366 + +0.0 55,366 + +0.4 55,366 + +0.2 55,366 + +0.8 55,366 + -0.1 55,366 + +0.4 55,366 + -0.9 55,367 - +0.2 55,367 - +0.1 55,367 - +0.2 55,367 - -0.3 55,367 - -0.4 55,367 - +0.0 55,367 - +0.3 55,367 - +0.2 55,367 - +0.6 55,980 - +0.3 56,025 - +0.3 56,025 - +0.4 56,085 + H281DRAFT_05783 0.12 -0.3 56,106 + H281DRAFT_05783 0.14 -0.5 56,276 + H281DRAFT_05783 0.24 +0.0 56,277 - H281DRAFT_05783 0.24 +0.5
Or see this region's nucleotide sequence