Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04668 and H281DRAFT_04669 are separated by 117 nucleotides H281DRAFT_04669 and H281DRAFT_04670 are separated by 198 nucleotides H281DRAFT_04670 and H281DRAFT_04671 are separated by 103 nucleotides
H281DRAFT_04668: H281DRAFT_04668 - preprotein translocase subunit SecD, at 69,820 to 71,880
_04668
H281DRAFT_04669: H281DRAFT_04669 - protein translocase subunit yajC, at 71,998 to 72,327
_04669
H281DRAFT_04670: H281DRAFT_04670 - tRNA-guanine transglycosylase, at 72,526 to 73,716
_04670
H281DRAFT_04671: H281DRAFT_04671 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 73,820 to 74,887
_04671
Position (kb) 72
73
74 Strain fitness (log2 ratio) -1
0
1 at 71.885 kb on - strand at 72.345 kb on - strand at 72.345 kb on - strand at 72.636 kb on - strand at 72.636 kb on - strand at 72.638 kb on + strand at 72.638 kb on + strand at 72.734 kb on + strand, within H281DRAFT_04670 at 72.735 kb on - strand, within H281DRAFT_04670 at 72.924 kb on - strand, within H281DRAFT_04670 at 73.220 kb on + strand, within H281DRAFT_04670 at 73.491 kb on + strand, within H281DRAFT_04670 at 73.559 kb on + strand, within H281DRAFT_04670 at 73.559 kb on + strand, within H281DRAFT_04670 at 73.722 kb on + strand at 73.723 kb on - strand at 74.388 kb on + strand, within H281DRAFT_04671 at 74.496 kb on + strand, within H281DRAFT_04671 at 74.497 kb on - strand, within H281DRAFT_04671 at 74.497 kb on - strand, within H281DRAFT_04671 at 74.690 kb on - strand, within H281DRAFT_04671
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 71,885 - -0.3 72,345 - -0.2 72,345 - +0.7 72,636 - -0.8 72,636 - +0.1 72,638 + +0.4 72,638 + +0.4 72,734 + H281DRAFT_04670 0.17 +1.2 72,735 - H281DRAFT_04670 0.18 -0.3 72,924 - H281DRAFT_04670 0.33 +0.5 73,220 + H281DRAFT_04670 0.58 +0.7 73,491 + H281DRAFT_04670 0.81 +1.5 73,559 + H281DRAFT_04670 0.87 -0.7 73,559 + H281DRAFT_04670 0.87 -0.2 73,722 + +0.4 73,723 - -0.7 74,388 + H281DRAFT_04671 0.53 -1.0 74,496 + H281DRAFT_04671 0.63 -0.7 74,497 - H281DRAFT_04671 0.63 -0.3 74,497 - H281DRAFT_04671 0.63 -0.3 74,690 - H281DRAFT_04671 0.81 +0.2
Or see this region's nucleotide sequence