Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04415 and H281DRAFT_04416 are separated by 26 nucleotides H281DRAFT_04416 and H281DRAFT_04417 are separated by 62 nucleotides H281DRAFT_04417 and H281DRAFT_04418 are separated by 93 nucleotides
H281DRAFT_04415: H281DRAFT_04415 - phosphate uptake regulator, PhoU, at 134,323 to 135,027
_04415
H281DRAFT_04416: H281DRAFT_04416 - two component transcriptional regulator, winged helix family, at 135,054 to 135,755
_04416
H281DRAFT_04417: H281DRAFT_04417 - two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR, at 135,818 to 137,131
_04417
H281DRAFT_04418: H281DRAFT_04418 - polyphosphate kinase, at 137,225 to 139,288
_04418
Position (kb) 135
136
137
138 Strain fitness (log2 ratio) -1
0
1 at 134.849 kb on - strand, within H281DRAFT_04415 at 134.960 kb on - strand at 134.960 kb on - strand at 135.036 kb on + strand at 135.188 kb on - strand, within H281DRAFT_04416 at 135.188 kb on - strand, within H281DRAFT_04416 at 135.188 kb on - strand, within H281DRAFT_04416 at 135.188 kb on - strand, within H281DRAFT_04416 at 135.704 kb on + strand at 135.704 kb on + strand at 135.868 kb on - strand at 135.928 kb on - strand at 136.044 kb on - strand, within H281DRAFT_04417 at 136.046 kb on + strand, within H281DRAFT_04417 at 136.298 kb on + strand, within H281DRAFT_04417 at 136.371 kb on - strand, within H281DRAFT_04417 at 136.820 kb on + strand, within H281DRAFT_04417 at 136.822 kb on + strand, within H281DRAFT_04417 at 136.823 kb on - strand at 137.096 kb on + strand at 137.178 kb on + strand at 137.181 kb on - strand at 137.182 kb on + strand at 137.182 kb on + strand at 137.183 kb on - strand at 137.183 kb on - strand at 137.183 kb on - strand at 137.186 kb on + strand at 137.187 kb on - strand at 137.457 kb on + strand, within H281DRAFT_04418 at 137.458 kb on - strand, within H281DRAFT_04418 at 137.481 kb on + strand, within H281DRAFT_04418 at 137.487 kb on + strand, within H281DRAFT_04418 at 137.487 kb on + strand, within H281DRAFT_04418 at 137.488 kb on - strand, within H281DRAFT_04418 at 137.488 kb on - strand, within H281DRAFT_04418 at 137.488 kb on - strand, within H281DRAFT_04418 at 137.630 kb on + strand, within H281DRAFT_04418 at 137.631 kb on - strand, within H281DRAFT_04418 at 137.769 kb on - strand, within H281DRAFT_04418 at 137.874 kb on + strand, within H281DRAFT_04418 at 137.898 kb on + strand, within H281DRAFT_04418 at 137.899 kb on - strand, within H281DRAFT_04418 at 137.922 kb on + strand, within H281DRAFT_04418 at 138.009 kb on + strand, within H281DRAFT_04418
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 134,849 - H281DRAFT_04415 0.75 +0.1 134,960 - -0.1 134,960 - -0.2 135,036 + -0.8 135,188 - H281DRAFT_04416 0.19 +0.2 135,188 - H281DRAFT_04416 0.19 -0.2 135,188 - H281DRAFT_04416 0.19 +0.1 135,188 - H281DRAFT_04416 0.19 +0.1 135,704 + -0.0 135,704 + -0.0 135,868 - -0.1 135,928 - +0.1 136,044 - H281DRAFT_04417 0.17 +0.8 136,046 + H281DRAFT_04417 0.17 +0.4 136,298 + H281DRAFT_04417 0.37 -0.0 136,371 - H281DRAFT_04417 0.42 +0.5 136,820 + H281DRAFT_04417 0.76 +0.5 136,822 + H281DRAFT_04417 0.76 +0.6 136,823 - +0.3 137,096 + -0.5 137,178 + -0.2 137,181 - -0.1 137,182 + -0.1 137,182 + -0.0 137,183 - +0.2 137,183 - -0.1 137,183 - +0.3 137,186 + -0.2 137,187 - -0.8 137,457 + H281DRAFT_04418 0.11 -0.4 137,458 - H281DRAFT_04418 0.11 +0.1 137,481 + H281DRAFT_04418 0.12 +0.5 137,487 + H281DRAFT_04418 0.13 +0.0 137,487 + H281DRAFT_04418 0.13 +0.3 137,488 - H281DRAFT_04418 0.13 -0.1 137,488 - H281DRAFT_04418 0.13 +0.5 137,488 - H281DRAFT_04418 0.13 +1.4 137,630 + H281DRAFT_04418 0.20 -0.9 137,631 - H281DRAFT_04418 0.20 +0.3 137,769 - H281DRAFT_04418 0.26 +1.1 137,874 + H281DRAFT_04418 0.31 +0.5 137,898 + H281DRAFT_04418 0.33 +0.0 137,899 - H281DRAFT_04418 0.33 +0.6 137,922 + H281DRAFT_04418 0.34 +0.3 138,009 + H281DRAFT_04418 0.38 -0.4
Or see this region's nucleotide sequence