Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02871 and H281DRAFT_02872 overlap by 4 nucleotides H281DRAFT_02872 and H281DRAFT_02873 are separated by 114 nucleotides H281DRAFT_02873 and H281DRAFT_02874 are separated by 4 nucleotides H281DRAFT_02874 and H281DRAFT_02875 are separated by 86 nucleotides
H281DRAFT_02871: H281DRAFT_02871 - 3-(3-hydroxy-phenyl)propionate hydroxylase, at 468,445 to 470,217
_02871
H281DRAFT_02872: H281DRAFT_02872 - hypothetical protein, at 470,214 to 470,408
_02872
H281DRAFT_02873: H281DRAFT_02873 - ketopantoate reductase (EC 1.1.1.169), at 470,523 to 471,497
_02873
H281DRAFT_02874: H281DRAFT_02874 - Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase, at 471,502 to 472,293
_02874
H281DRAFT_02875: H281DRAFT_02875 - aromatic-amino-acid transaminase, at 472,380 to 473,579
_02875
Position (kb) 470
471
472 Strain fitness (log2 ratio) -1
0
1 at 469.539 kb on + strand, within H281DRAFT_02871 at 469.580 kb on - strand, within H281DRAFT_02871 at 469.717 kb on + strand, within H281DRAFT_02871 at 469.870 kb on - strand, within H281DRAFT_02871 at 470.102 kb on - strand at 470.239 kb on + strand, within H281DRAFT_02872 at 470.239 kb on + strand, within H281DRAFT_02872 at 470.240 kb on - strand, within H281DRAFT_02872 at 470.241 kb on + strand, within H281DRAFT_02872 at 470.242 kb on - strand, within H281DRAFT_02872 at 470.242 kb on - strand, within H281DRAFT_02872 at 470.244 kb on - strand, within H281DRAFT_02872 at 470.244 kb on - strand, within H281DRAFT_02872 at 470.244 kb on - strand, within H281DRAFT_02872 at 470.295 kb on + strand, within H281DRAFT_02872 at 470.406 kb on + strand at 470.407 kb on - strand at 470.407 kb on - strand at 470.495 kb on + strand at 470.496 kb on - strand at 470.496 kb on - strand at 470.496 kb on - strand at 470.497 kb on + strand at 470.498 kb on - strand at 470.527 kb on + strand at 470.581 kb on + strand at 470.665 kb on - strand, within H281DRAFT_02873 at 471.481 kb on + strand at 471.554 kb on + strand at 471.554 kb on + strand at 472.161 kb on - strand, within H281DRAFT_02874 at 472.278 kb on + strand at 472.279 kb on - strand at 472.279 kb on - strand at 472.477 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 469,539 + H281DRAFT_02871 0.62 +0.2 469,580 - H281DRAFT_02871 0.64 -0.4 469,717 + H281DRAFT_02871 0.72 +0.0 469,870 - H281DRAFT_02871 0.80 -1.5 470,102 - -0.4 470,239 + H281DRAFT_02872 0.13 -0.6 470,239 + H281DRAFT_02872 0.13 +0.1 470,240 - H281DRAFT_02872 0.13 +0.2 470,241 + H281DRAFT_02872 0.14 +0.5 470,242 - H281DRAFT_02872 0.14 -0.2 470,242 - H281DRAFT_02872 0.14 +0.3 470,244 - H281DRAFT_02872 0.15 +0.2 470,244 - H281DRAFT_02872 0.15 +0.2 470,244 - H281DRAFT_02872 0.15 -0.1 470,295 + H281DRAFT_02872 0.42 -0.3 470,406 + +0.6 470,407 - -0.0 470,407 - +0.1 470,495 + +0.8 470,496 - -0.5 470,496 - -0.2 470,496 - +0.4 470,497 + +0.4 470,498 - +0.7 470,527 + -1.2 470,581 + +0.0 470,665 - H281DRAFT_02873 0.15 -0.6 471,481 + +0.4 471,554 + -0.1 471,554 + -0.4 472,161 - H281DRAFT_02874 0.83 +0.5 472,278 + +0.3 472,279 - +0.3 472,279 - +0.5 472,477 + -0.2
Or see this region's nucleotide sequence