Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02754 and H281DRAFT_02755 overlap by 8 nucleotides H281DRAFT_02755 and H281DRAFT_02756 are separated by 215 nucleotides H281DRAFT_02756 and H281DRAFT_02757 are separated by 43 nucleotides
H281DRAFT_02754: H281DRAFT_02754 - Glucose/arabinose dehydrogenase, beta-propeller fold, at 342,440 to 343,759
_02754
H281DRAFT_02755: H281DRAFT_02755 - Uncharacterized membrane protein, at 343,752 to 344,201
_02755
H281DRAFT_02756: H281DRAFT_02756 - Cupin domain protein, at 344,417 to 344,812
_02756
H281DRAFT_02757: H281DRAFT_02757 - alkylhydroperoxidase AhpD family core domain-containing protein, at 344,856 to 345,335
_02757
Position (kb) 343
344
345 Strain fitness (log2 ratio) -1
0
1
2 at 342.837 kb on + strand, within H281DRAFT_02754 at 342.841 kb on - strand, within H281DRAFT_02754 at 342.847 kb on - strand, within H281DRAFT_02754 at 342.999 kb on + strand, within H281DRAFT_02754 at 343.754 kb on - strand at 343.980 kb on + strand, within H281DRAFT_02755 at 344.064 kb on + strand, within H281DRAFT_02755 at 344.083 kb on + strand, within H281DRAFT_02755 at 344.123 kb on - strand, within H281DRAFT_02755 at 344.269 kb on + strand at 344.611 kb on - strand, within H281DRAFT_02756 at 344.611 kb on - strand, within H281DRAFT_02756
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 342,837 + H281DRAFT_02754 0.30 +1.2 342,841 - H281DRAFT_02754 0.30 +1.1 342,847 - H281DRAFT_02754 0.31 +0.1 342,999 + H281DRAFT_02754 0.42 +0.2 343,754 - -0.8 343,980 + H281DRAFT_02755 0.51 +0.2 344,064 + H281DRAFT_02755 0.69 +0.5 344,083 + H281DRAFT_02755 0.74 +0.5 344,123 - H281DRAFT_02755 0.82 +0.8 344,269 + +1.8 344,611 - H281DRAFT_02756 0.49 -0.1 344,611 - H281DRAFT_02756 0.49 +0.5
Or see this region's nucleotide sequence