Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02511 and H281DRAFT_02512 are separated by 341 nucleotides H281DRAFT_02512 and H281DRAFT_02513 are separated by 138 nucleotides
H281DRAFT_02511: H281DRAFT_02511 - transcriptional regulator, LysR family, at 87,001 to 87,903
_02511
H281DRAFT_02512: H281DRAFT_02512 - LysR family transcriptional regulator, glycine cleavage system transcriptional activator, at 88,245 to 89,129
_02512
H281DRAFT_02513: H281DRAFT_02513 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 89,268 to 90,509
_02513
Position (kb) 88
89
90 Strain fitness (log2 ratio) -1
0
1 at 87.435 kb on - strand, within H281DRAFT_02511 at 87.724 kb on + strand, within H281DRAFT_02511 at 87.724 kb on + strand, within H281DRAFT_02511 at 87.724 kb on + strand, within H281DRAFT_02511 at 87.725 kb on - strand, within H281DRAFT_02511 at 88.239 kb on + strand at 88.240 kb on - strand at 88.389 kb on + strand, within H281DRAFT_02512 at 88.405 kb on + strand, within H281DRAFT_02512 at 88.406 kb on - strand, within H281DRAFT_02512 at 89.044 kb on - strand at 89.111 kb on + strand at 89.112 kb on - strand at 89.184 kb on + strand at 89.426 kb on - strand, within H281DRAFT_02513 at 89.469 kb on + strand, within H281DRAFT_02513 at 89.469 kb on + strand, within H281DRAFT_02513 at 89.470 kb on - strand, within H281DRAFT_02513 at 89.470 kb on - strand, within H281DRAFT_02513 at 89.470 kb on - strand, within H281DRAFT_02513 at 89.629 kb on - strand, within H281DRAFT_02513 at 89.751 kb on - strand, within H281DRAFT_02513 at 89.869 kb on - strand, within H281DRAFT_02513 at 89.869 kb on - strand, within H281DRAFT_02513 at 89.959 kb on - strand, within H281DRAFT_02513 at 90.041 kb on - strand, within H281DRAFT_02513 at 90.041 kb on - strand, within H281DRAFT_02513
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 87,435 - H281DRAFT_02511 0.48 -1.6 87,724 + H281DRAFT_02511 0.80 +0.3 87,724 + H281DRAFT_02511 0.80 +1.4 87,724 + H281DRAFT_02511 0.80 -0.2 87,725 - H281DRAFT_02511 0.80 -0.1 88,239 + -0.4 88,240 - -0.5 88,389 + H281DRAFT_02512 0.16 +0.4 88,405 + H281DRAFT_02512 0.18 +0.3 88,406 - H281DRAFT_02512 0.18 +0.7 89,044 - -0.1 89,111 + +0.3 89,112 - -0.1 89,184 + -0.7 89,426 - H281DRAFT_02513 0.13 +0.5 89,469 + H281DRAFT_02513 0.16 -0.1 89,469 + H281DRAFT_02513 0.16 +0.8 89,470 - H281DRAFT_02513 0.16 +0.2 89,470 - H281DRAFT_02513 0.16 +0.4 89,470 - H281DRAFT_02513 0.16 +0.5 89,629 - H281DRAFT_02513 0.29 +0.5 89,751 - H281DRAFT_02513 0.39 +0.5 89,869 - H281DRAFT_02513 0.48 +1.6 89,869 - H281DRAFT_02513 0.48 +0.1 89,959 - H281DRAFT_02513 0.56 +0.4 90,041 - H281DRAFT_02513 0.62 -0.2 90,041 - H281DRAFT_02513 0.62 +0.4
Or see this region's nucleotide sequence