Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01652 and H281DRAFT_01653 are separated by 160 nucleotides H281DRAFT_01653 and H281DRAFT_01654 overlap by 4 nucleotides H281DRAFT_01654 and H281DRAFT_01655 are separated by 66 nucleotides
H281DRAFT_01652: H281DRAFT_01652 - DNA-binding transcriptional regulator, LysR family, at 534,409 to 535,329
_01652
H281DRAFT_01653: H281DRAFT_01653 - Phenylpropionate dioxygenase, large terminal subunit, at 535,490 to 536,773
_01653
H281DRAFT_01654: H281DRAFT_01654 - 3-phenylpropionate/cinnamic acid dioxygenase, small subunit, at 536,770 to 537,270
_01654
H281DRAFT_01655: H281DRAFT_01655 - 4-oxalocrotonate tautomerase family enzyme, at 537,337 to 537,711
_01655
Position (kb) 535
536
537 Strain fitness (log2 ratio) -1
0
1
2 at 534.602 kb on - strand, within H281DRAFT_01652 at 534.661 kb on - strand, within H281DRAFT_01652 at 534.811 kb on + strand, within H281DRAFT_01652 at 534.811 kb on + strand, within H281DRAFT_01652 at 534.812 kb on - strand, within H281DRAFT_01652 at 534.816 kb on - strand, within H281DRAFT_01652 at 534.837 kb on + strand, within H281DRAFT_01652 at 534.838 kb on - strand, within H281DRAFT_01652 at 534.914 kb on - strand, within H281DRAFT_01652 at 535.473 kb on - strand at 535.505 kb on + strand at 535.506 kb on - strand at 535.571 kb on + strand at 536.123 kb on + strand, within H281DRAFT_01653 at 536.361 kb on + strand, within H281DRAFT_01653 at 536.362 kb on - strand, within H281DRAFT_01653 at 536.624 kb on + strand, within H281DRAFT_01653 at 536.624 kb on + strand, within H281DRAFT_01653 at 536.866 kb on + strand, within H281DRAFT_01654 at 536.938 kb on + strand, within H281DRAFT_01654 at 536.956 kb on + strand, within H281DRAFT_01654 at 537.729 kb on - strand at 537.767 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 534,602 - H281DRAFT_01652 0.21 +0.6 534,661 - H281DRAFT_01652 0.27 +0.4 534,811 + H281DRAFT_01652 0.44 -0.2 534,811 + H281DRAFT_01652 0.44 -0.4 534,812 - H281DRAFT_01652 0.44 +0.1 534,816 - H281DRAFT_01652 0.44 -0.3 534,837 + H281DRAFT_01652 0.46 -0.2 534,838 - H281DRAFT_01652 0.47 +0.0 534,914 - H281DRAFT_01652 0.55 +0.7 535,473 - -0.4 535,505 + +0.6 535,506 - -0.5 535,571 + -0.2 536,123 + H281DRAFT_01653 0.49 -1.2 536,361 + H281DRAFT_01653 0.68 +1.8 536,362 - H281DRAFT_01653 0.68 +0.2 536,624 + H281DRAFT_01653 0.88 -0.2 536,624 + H281DRAFT_01653 0.88 +0.4 536,866 + H281DRAFT_01654 0.19 +0.4 536,938 + H281DRAFT_01654 0.34 +0.8 536,956 + H281DRAFT_01654 0.37 -0.7 537,729 - +0.2 537,767 + -0.6
Or see this region's nucleotide sequence