Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01544 and H281DRAFT_01545 are separated by 3 nucleotides H281DRAFT_01545 and H281DRAFT_01546 are separated by 63 nucleotides H281DRAFT_01546 and H281DRAFT_01547 are separated by 100 nucleotides
H281DRAFT_01544: H281DRAFT_01544 - Glycine/D-amino acid oxidase (deaminating), at 416,573 to 417,922
_01544
H281DRAFT_01545: H281DRAFT_01545 - putative hydrolase of the HAD superfamily, at 417,926 to 418,636
_01545
H281DRAFT_01546: H281DRAFT_01546 - putative spermidine/putrescine transport system ATP-binding protein, at 418,700 to 419,776
_01546
H281DRAFT_01547: H281DRAFT_01547 - DNA-binding transcriptional regulator, LysR family, at 419,877 to 420,848
_01547
Position (kb) 418
419
420 Strain fitness (log2 ratio) -1
0
1 at 418.174 kb on - strand, within H281DRAFT_01545 at 418.431 kb on + strand, within H281DRAFT_01545 at 418.432 kb on - strand, within H281DRAFT_01545 at 418.432 kb on - strand, within H281DRAFT_01545 at 418.437 kb on + strand, within H281DRAFT_01545 at 418.437 kb on + strand at 418.438 kb on - strand, within H281DRAFT_01545 at 418.474 kb on - strand, within H281DRAFT_01545 at 418.494 kb on + strand, within H281DRAFT_01545 at 419.062 kb on + strand, within H281DRAFT_01546 at 419.063 kb on - strand, within H281DRAFT_01546 at 419.098 kb on - strand, within H281DRAFT_01546 at 419.196 kb on + strand, within H281DRAFT_01546 at 419.511 kb on + strand, within H281DRAFT_01546 at 419.512 kb on - strand, within H281DRAFT_01546 at 419.714 kb on + strand at 419.815 kb on + strand at 419.816 kb on - strand at 419.817 kb on + strand at 419.817 kb on + strand at 419.818 kb on - strand at 419.887 kb on + strand at 419.976 kb on + strand, within H281DRAFT_01547 at 419.977 kb on - strand, within H281DRAFT_01547 at 420.093 kb on + strand, within H281DRAFT_01547 at 420.125 kb on - strand, within H281DRAFT_01547
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 418,174 - H281DRAFT_01545 0.35 -0.8 418,431 + H281DRAFT_01545 0.71 +0.3 418,432 - H281DRAFT_01545 0.71 +0.4 418,432 - H281DRAFT_01545 0.71 +0.1 418,437 + H281DRAFT_01545 0.72 +0.3 418,437 + +0.4 418,438 - H281DRAFT_01545 0.72 -0.2 418,474 - H281DRAFT_01545 0.77 -0.4 418,494 + H281DRAFT_01545 0.80 +0.1 419,062 + H281DRAFT_01546 0.34 +0.8 419,063 - H281DRAFT_01546 0.34 +0.5 419,098 - H281DRAFT_01546 0.37 +0.4 419,196 + H281DRAFT_01546 0.46 +0.5 419,511 + H281DRAFT_01546 0.75 +0.2 419,512 - H281DRAFT_01546 0.75 +1.0 419,714 + -0.6 419,815 + +0.0 419,816 - -0.2 419,817 + -0.1 419,817 + +0.0 419,818 - -0.3 419,887 + -0.1 419,976 + H281DRAFT_01547 0.10 -0.3 419,977 - H281DRAFT_01547 0.10 -0.1 420,093 + H281DRAFT_01547 0.22 +0.4 420,125 - H281DRAFT_01547 0.26 +0.1
Or see this region's nucleotide sequence