Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00724

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00723 and H281DRAFT_00724 are separated by 41 nucleotidesH281DRAFT_00724 and H281DRAFT_00725 overlap by 4 nucleotides H281DRAFT_00723: H281DRAFT_00723 - beta-mannosidase, at 814,444 to 817,029 _00723 H281DRAFT_00724: H281DRAFT_00724 - protein of unknown function (DUF1839), at 817,071 to 818,156 _00724 H281DRAFT_00725: H281DRAFT_00725 - hypothetical protein, at 818,153 to 819,217 _00725 Position (kb) 817 818 819Strain fitness (log2 ratio) -1 0 1at 816.344 kb on - strand, within H281DRAFT_00723at 816.360 kb on + strand, within H281DRAFT_00723at 816.483 kb on + strand, within H281DRAFT_00723at 816.598 kb on + strand, within H281DRAFT_00723at 816.918 kb on + strandat 816.918 kb on + strandat 816.919 kb on - strandat 817.569 kb on + strand, within H281DRAFT_00724at 817.728 kb on + strand, within H281DRAFT_00724at 817.960 kb on + strand, within H281DRAFT_00724at 818.241 kb on - strandat 818.612 kb on + strand, within H281DRAFT_00725

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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816,344 - H281DRAFT_00723 0.73 -0.2
816,360 + H281DRAFT_00723 0.74 +0.3
816,483 + H281DRAFT_00723 0.79 +0.4
816,598 + H281DRAFT_00723 0.83 +0.9
816,918 + -0.0
816,918 + +0.3
816,919 - -0.3
817,569 + H281DRAFT_00724 0.46 -0.1
817,728 + H281DRAFT_00724 0.60 +0.2
817,960 + H281DRAFT_00724 0.82 +1.3
818,241 - -0.0
818,612 + H281DRAFT_00725 0.43 +0.1

Or see this region's nucleotide sequence